Name | 00335716_01_0 |
Workunit | 4286 |
Created | 27 Nov 2017, 22:01:42 UTC |
Sent | 27 Nov 2017, 22:01:50 UTC |
Report deadline | 28 Nov 2017, 6:01:50 UTC |
Received | 27 Nov 2017, 22:11:46 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 1 |
Run time | 8 min 45 sec |
CPU time | 5 min 22 sec |
Validate state | Valid |
Credit | 3.52 |
Device peak FLOPS | 2.89 GFLOPS |
Application version | boinc2docker v1.11 (vbox64_mt) x86_64-pc-linux-gnu |
Peak working set size | 1.75 GB |
Peak swap size | 3.32 GB |
Peak disk usage | 1.81 GB |
<core_client_version>7.6.33</core_client_version> <![CDATA[ <stderr_txt> 2017-11-27 17:02:41 (30385): vboxwrapper (7.7.26197): starting 2017-11-27 17:02:42 (30385): Feature: Checkpoint interval offset (510 seconds) 2017-11-27 17:02:42 (30385): Detected: VirtualBox VboxManage Interface (Version: 5.1.8) 2017-11-27 17:02:42 (30385): Detected: Minimum checkpoint interval (600.000000 seconds) 2017-11-27 17:02:43 (30385): Create VM. (boinc_efc0f978fd789310, slot#0) 2017-11-27 17:02:43 (30385): Updating drive controller type and model for desired configuration. 2017-11-27 17:02:43 (30385): Setting Memory Size for VM. (3072MB) 2017-11-27 17:02:43 (30385): Setting CPU Count for VM. (1) 2017-11-27 17:02:43 (30385): Setting Chipset Options for VM. 2017-11-27 17:02:43 (30385): Setting Boot Options for VM. 2017-11-27 17:02:43 (30385): Setting Network Configuration for NAT. 2017-11-27 17:02:43 (30385): Enabling VM Network Access. 2017-11-27 17:02:44 (30385): Disabling USB Support for VM. 2017-11-27 17:02:44 (30385): Disabling COM Port Support for VM. 2017-11-27 17:02:44 (30385): Disabling LPT Port Support for VM. 2017-11-27 17:02:44 (30385): Disabling Audio Support for VM. 2017-11-27 17:02:44 (30385): Disabling Clipboard Support for VM. 2017-11-27 17:02:44 (30385): Disabling Drag and Drop Support for VM. 2017-11-27 17:02:44 (30385): Adding storage controller(s) to VM. 2017-11-27 17:02:44 (30385): Adding virtual ISO 9660 disk drive to VM. (vm_isocontext.iso) 2017-11-27 17:02:45 (30385): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB) 2017-11-27 17:02:45 (30385): Enabling shared directory for VM. 2017-11-27 17:02:46 (30385): Starting VM. (boinc_efc0f978fd789310, slot#0) 2017-11-27 17:02:48 (30385): Successfully started VM. (PID = '30704') 2017-11-27 17:02:48 (30385): Reporting VM Process ID to BOINC. 2017-11-27 17:02:48 (30385): Guest Log: BIOS: VirtualBox 5.1.8 2017-11-27 17:02:48 (30385): VM state change detected. (old = 'poweroff', new = 'running') 2017-11-27 17:02:48 (30385): Preference change detected 2017-11-27 17:02:48 (30385): Setting CPU throttle for VM. (100%) 2017-11-27 17:02:48 (30385): Setting checkpoint interval to 600 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 600 seconds)) 2017-11-27 17:02:50 (30385): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032 2017-11-27 17:02:50 (30385): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=80 2017-11-27 17:02:50 (30385): Guest Log: BIOS: Boot from Hard Disk 0 failed 2017-11-27 17:02:50 (30385): Guest Log: BIOS: Boot : bseqnr=2, bootseq=0003 2017-11-27 17:02:50 (30385): Guest Log: BIOS: Booting from CD-ROM... 2017-11-27 17:02:50 (30385): Guest Log: BIOS: KBD: unsupported int 16h function 03 2017-11-27 17:02:50 (30385): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 2017-11-27 17:03:04 (30385): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds 2017-11-27 17:03:04 (30385): Guest Log: vboxguest: misc device minor 56, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000) 2017-11-27 17:03:05 (30385): Guest Log: net.ipv4.ip_forward = 1 2017-11-27 17:03:05 (30385): Guest Log: sysctl: cannot stat /proc/sys/net/ipv6/conf/all/forwarding: No such file or directory 2017-11-27 17:03:05 (30385): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory 2017-11-27 17:03:05 (30385): Guest Log: sysctl: "cannot stat %s" is an unknown key 2017-11-27 17:03:05 (30385): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory 2017-11-27 17:03:05 (30385): Guest Log: Segmentation fault 2017-11-27 17:03:06 (30385): Guest Log: automount ... 2017-11-27 17:03:06 (30385): Guest Log: Is the disk unpartitioned?, test for the 'boot2docker format-me' string 2017-11-27 17:03:06 (30385): Guest Log: automount over. 2017-11-27 17:03:06 (30385): Guest Log: [1;32mSetting hostname to [1;35mboot2docker[0;39m [1;32mDone.[0;39m 2017-11-27 17:03:06 (30385): Guest Log: Mon Nov 27 17:03:04 UTC 2017 dhcp ------------------------------- 2017-11-27 17:03:11 (30385): Guest Log: udevadm settle - timeout of 5 seconds reached, the event queue contains: 2017-11-27 17:03:11 (30385): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1316) 2017-11-27 17:03:13 (30385): Guest Log: Mon Nov 27 17:03:11 UTC 2017 dhcp ------------------------------- 2017-11-27 17:03:13 (30385): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar 4 2016 17:38:55) release log 2017-11-27 17:03:13 (30385): Guest Log: 00:00:00.000666 main Log opened 2017-11-27T17:03:11.499880000Z 2017-11-27 17:03:13 (30385): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar 4 2016 17:38:55) release log 2017-11-27 17:03:13 (30385): Guest Log: 00:00:00.000666 main Log opened 2017-11-27T17:03:11.499880000Z 2017-11-27 17:03:13 (30385): Guest Log: 00:00:00.004348 main OS Product: Linux 2017-11-27 17:03:13 (30385): Guest Log: 00:00:00.004432 main OS Release: 4.1.19-boot2docker 2017-11-27 17:03:13 (30385): Guest Log: 00:00:00.004502 main OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016 2017-11-27 17:03:13 (30385): Guest Log: 00:00:00.004566 main Executable: /sbin/VBoxService 2017-11-27 17:03:13 (30385): Guest Log: 00:00:00.004575 main Process ID: 746 2017-11-27 17:03:13 (30385): Guest Log: 00:00:00.004579 main Package type: LINUX_64BITS_GENERIC 2017-11-27 17:03:13 (30385): Guest Log: 00:00:00.004348 main OS Product: Linux 2017-11-27 17:03:13 (30385): Guest Log: 00:00:00.004432 main OS Release: 4.1.19-boot2docker 2017-11-27 17:03:13 (30385): Guest Log: 00:00:00.004502 main OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016 2017-11-27 17:03:13 (30385): Guest Log: 00:00:00.004566 main Executable: /sbin/VBoxService 2017-11-27 17:03:13 (30385): Guest Log: 00:00:00.004575 main Process ID: 746 2017-11-27 17:03:13 (30385): Guest Log: 00:00:00.004579 main Package type: LINUX_64BITS_GENERIC 2017-11-27 17:03:13 (30385): Guest Log: 00:00:00.013619 main 5.0.16 r105871 started. Verbose level = 0 2017-11-27 17:03:13 (30385): Guest Log: 00:00:00.013619 main 5.0.16 r105871 started. Verbose level = 0 2017-11-27 17:03:13 (30385): Guest Log: 00:00:00.065867 vminfo rtldrNativeLoad: dlopen('libdbus-1.so.3', RTLD_NOW | RTLD_LOCAL) failed: libdbus-1.so.3: cannot open shared object file: No such file or directory 2017-11-27 17:03:13 (30385): Guest Log: 00:00:00.066303 vminfo Error: Unable to connect to system D-Bus (1/3): D-Bus not installed 2017-11-27 17:03:14 (30385): Guest Log: Mounting BOINC shared/... 2017-11-27 17:03:14 (30385): Guest Log: ------------------- 2017-11-27 17:03:14 (30385): Guest Log: Mon Nov 27 22:03:13 UTC 2017 2017-11-27 17:03:18 (30385): Guest Log: 00:00:05.071219 vminfo Error: Unable to connect to system D-Bus (2/3): D-Bus not installed 2017-11-27 17:03:19 (30385): Guest Log: Mon Nov 27 22:03:18 UTC 2017 2017-11-27 17:03:19 (30385): Guest Log: 1: lo: <LOOPBACK,UP,LOWER_UP> mtu 65536 qdisc noqueue state UNKNOWN group default 2017-11-27 17:03:19 (30385): Guest Log: link/loopback 00:00:00:00:00:00 brd 00:00:00:00:00:00 2017-11-27 17:03:19 (30385): Guest Log: inet 127.0.0.1/8 scope host lo 2017-11-27 17:03:19 (30385): Guest Log: valid_lft forever preferred_lft forever 2017-11-27 17:03:19 (30385): Guest Log: inet6 ::1/128 scope host 2017-11-27 17:03:19 (30385): Guest Log: valid_lft forever preferred_lft forever 2017-11-27 17:03:19 (30385): Guest Log: 2: dummy0: <BROADCAST,NOARP> mtu 1500 qdisc noop state DOWN group default 2017-11-27 17:03:19 (30385): Guest Log: link/ether 32:a4:fd:90:35:ac brd ff:ff:ff:ff:ff:ff 2017-11-27 17:03:19 (30385): Guest Log: 3: eth0: <BROADCAST,MULTICAST,UP,LOWER_UP> mtu 1500 qdisc pfifo_fast state UP group default qlen 1000 2017-11-27 17:03:19 (30385): Guest Log: valid_lft forever preferred_lft forever 2017-11-27 17:03:19 (30385): Guest Log: ------------------- 2017-11-27 17:03:19 (30385): Guest Log: Linking /etc/docker to /var/lib/boot2docker for persistence 2017-11-27 17:03:19 (30385): Guest Log: Waiting for Docker daemon to start... 2017-11-27 17:03:21 (30385): Guest Log: REPOSITORY TAG IMAGE ID CREATED SIZE 2017-11-27 17:03:21 (30385): Guest Log: Running boinc_app... 2017-11-27 17:03:21 (30385): Guest Log: Importing Docker image from BOINC... 2017-11-27 17:03:21 (30385): Guest Log: Filesystem Size Used Available Use% Mounted on 2017-11-27 17:03:21 (30385): Guest Log: tmpfs 2.6G 164.2M 2.5G 6% / 2017-11-27 17:03:21 (30385): Guest Log: tmpfs 1.5G 0 1.5G 0% /dev/shm 2017-11-27 17:03:21 (30385): Guest Log: cgroup 1.5G 0 1.5G 0% /sys/fs/cgroup 2017-11-27 17:03:21 (30385): Guest Log: shared 18.2G 15.9G 2.3G 87% /root/shared 2017-11-27 17:03:21 (30385): Guest Log: tmpfs 2.6G 164.2M 2.5G 6% /var/lib/docker/aufs 2017-11-27 17:03:23 (30385): Guest Log: 00:00:10.074328 vminfo Error: Unable to connect to system D-Bus (3/3): D-Bus not installed 2017-11-27 17:03:35 (30385): Guest Log: doing docker load... 2017-11-27 17:04:07 (30385): Guest Log: Filesystem Size Used Available Use% Mounted on 2017-11-27 17:04:07 (30385): Guest Log: tmpfs 2.6G 619.1M 2.0G 23% / 2017-11-27 17:04:07 (30385): Guest Log: tmpfs 1.5G 0 1.5G 0% /dev/shm 2017-11-27 17:04:07 (30385): Guest Log: cgroup 1.5G 0 1.5G 0% /sys/fs/cgroup 2017-11-27 17:04:07 (30385): Guest Log: shared 18.2G 15.7G 2.5G 86% /root/shared 2017-11-27 17:04:07 (30385): Guest Log: tmpfs 2.6G 619.1M 2.0G 23% /var/lib/docker/aufs 2017-11-27 17:04:07 (30385): Guest Log: total used free shared buff/cache available 2017-11-27 17:04:07 (30385): Guest Log: Mem: 3007 47 2304 619 655 2303 2017-11-27 17:04:07 (30385): Guest Log: Swap: 701 0 701 2017-11-27 17:04:07 (30385): Guest Log: Building apps directory... 2017-11-27 17:04:13 (30385): Guest Log: tar xf /root/shared/appsSource/rappture_grid_tag_1.7.2-6645-2077.tar --directory /root/shared/apps/share64/debian7/rappture/grid 2017-11-27 17:04:21 (30385): Guest Log: tar xf /root/shared/appsSource/rappture_grid_tag_1.7.2-6645-2077_links.tar --directory /root/shared/apps/share64/debian7/rappture/grid 2017-11-27 17:04:21 (30385): Guest Log: mv /root/shared/appsSource/rappture /root/shared/apps/share64/debian7/environ.d 2017-11-27 17:10:15 (30385): Guest Log: tar: ./vtk-5.8.0_links.tar: Wrote only 3584 of 10240 bytes 2017-11-27 17:10:22 (30385): Guest Log: tar: Exiting with failure status due to previous errors 2017-11-27 17:10:22 (30385): Guest Log: mkdir: can't create directory '/root/shared/apps/share64/debian7/vtk': Protocol error 2017-11-27 17:10:22 (30385): Guest Log: Prerun diagnostics... 2017-11-27 17:10:22 (30385): Guest Log: REPOSITORY TAG IMAGE ID CREATED SIZE 2017-11-27 17:10:23 (30385): Guest Log: nanohub_apps_base 11 a3831bfe0ebe 11 days ago 445.4 MB 2017-11-27 17:10:23 (30385): Guest Log: CONTAINER ID IMAGE COMMAND CREATED STATUS PORTS NAMES 2017-11-27 17:10:23 (30385): Guest Log: 455.0M /var/lib/docker 2017-11-27 17:10:23 (30385): Guest Log: total used free shared buff/cache available 2017-11-27 17:10:23 (30385): Guest Log: Mem: 3007 50 2288 619 668 2298 2017-11-27 17:10:23 (30385): Guest Log: Swap: 701 0 701 2017-11-27 17:10:23 (30385): Guest Log: Filesystem Size Used Available Use% Mounted on 2017-11-27 17:10:23 (30385): Guest Log: tmpfs 2.6G 619.1M 2.0G 23% / 2017-11-27 17:10:23 (30385): Guest Log: tmpfs 1.5G 0 1.5G 0% /dev/shm 2017-11-27 17:10:23 (30385): Guest Log: cgroup 1.5G 0 1.5G 0% /sys/fs/cgroup 2017-11-27 17:10:23 (30385): Guest Log: shared 18.2G 16.8G 1.4G 92% /root/shared 2017-11-27 17:10:23 (30385): Guest Log: tmpfs 2.6G 619.1M 2.0G 23% /var/lib/docker/aufs 2017-11-27 17:10:23 (30385): Guest Log: Running... 2017-11-27 17:10:24 (30385): Guest Log: 00335716_01.boinc 2017-11-27 17:10:24 (30385): Guest Log: 00335716_01.sh 2017-11-27 17:11:25 (30385): Guest Log: boinc_app exited (0) 2017-11-27 17:11:25 (30385): Guest Log: Saving results... 2017-11-27 17:11:25 (30385): Guest Log: 00335716_01_output.tar.gz 2017-11-27 17:11:25 (30385): VM Completion File Detected. 2017-11-27 17:11:25 (30385): Powering off VM. 2017-11-27 17:11:29 (30385): Successfully stopped VM. 2017-11-27 17:11:29 (30385): Deregistering VM. (boinc_efc0f978fd789310, slot#0) 2017-11-27 17:11:30 (30385): Removing network bandwidth throttle group from VM. 2017-11-27 17:11:30 (30385): Removing storage controller(s) from VM. 2017-11-27 17:11:30 (30385): Removing VM from VirtualBox. 2017-11-27 17:11:30 (30385): Removing virtual ISO 9660 disk from VirtualBox. 17:11:35 (30385): called boinc_finish(0) </stderr_txt> ]]>
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