Name | 00335685_01_2 |
Workunit | 4257 |
Created | 22 Nov 2017, 2:09:16 UTC |
Sent | 22 Nov 2017, 2:09:39 UTC |
Report deadline | 22 Nov 2017, 10:09:39 UTC |
Received | 22 Nov 2017, 2:34:43 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 13 |
Run time | 8 min 18 sec |
CPU time | 2 min 44 sec |
Validate state | Valid |
Credit | 2.57 |
Device peak FLOPS | 2.47 GFLOPS |
Application version | boinc2docker v1.11 (vbox64_mt) x86_64-pc-linux-gnu |
Peak working set size | 1.33 GB |
Peak swap size | 3.45 GB |
Peak disk usage | 930.68 MB |
<core_client_version>7.4.23</core_client_version> <![CDATA[ <stderr_txt> 2017-11-21 21:18:28 (20236): vboxwrapper (7.7.26197): starting 2017-11-21 21:18:28 (20236): Feature: Checkpoint interval offset (90 seconds) 2017-11-21 21:18:28 (20236): Detected: VirtualBox VboxManage Interface (Version: 5.1.8) 2017-11-21 21:18:28 (20236): Detected: Minimum checkpoint interval (600.000000 seconds) 2017-11-21 21:18:30 (20236): Create VM. (boinc_6f8cae517f6bc9d7, slot#1) 2017-11-21 21:18:30 (20236): Updating drive controller type and model for desired configuration. 2017-11-21 21:18:33 (20236): Setting Memory Size for VM. (3072MB) 2017-11-21 21:18:33 (20236): Setting CPU Count for VM. (1) 2017-11-21 21:18:34 (20236): Setting Chipset Options for VM. 2017-11-21 21:18:34 (20236): Setting Boot Options for VM. 2017-11-21 21:18:34 (20236): Setting Network Configuration for NAT. 2017-11-21 21:18:35 (20236): Enabling VM Network Access. 2017-11-21 21:18:35 (20236): Disabling USB Support for VM. 2017-11-21 21:18:36 (20236): Disabling COM Port Support for VM. 2017-11-21 21:18:37 (20236): Disabling LPT Port Support for VM. 2017-11-21 21:18:37 (20236): Disabling Audio Support for VM. 2017-11-21 21:18:38 (20236): Disabling Clipboard Support for VM. 2017-11-21 21:18:38 (20236): Disabling Drag and Drop Support for VM. 2017-11-21 21:18:39 (20236): Adding storage controller(s) to VM. 2017-11-21 21:18:39 (20236): Adding virtual ISO 9660 disk drive to VM. (vm_isocontext.iso) 2017-11-21 21:18:40 (20236): Adding VirtualBox Guest Additions to VM. 2017-11-21 21:18:40 (20236): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB) 2017-11-21 21:18:41 (20236): Enabling shared directory for VM. 2017-11-21 21:18:41 (20236): Starting VM. (boinc_6f8cae517f6bc9d7, slot#1) 2017-11-21 21:18:43 (20236): Successfully started VM. (PID = '21563') 2017-11-21 21:18:43 (20236): Reporting VM Process ID to BOINC. 2017-11-21 21:18:43 (20236): Guest Log: BIOS: VirtualBox 5.1.8 2017-11-21 21:18:43 (20236): VM state change detected. (old = 'poweroff', new = 'running') 2017-11-21 21:18:43 (20236): Preference change detected 2017-11-21 21:18:43 (20236): Setting CPU throttle for VM. (50%) 2017-11-21 21:18:44 (20236): Setting checkpoint interval to 600 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 600 seconds)) 2017-11-21 21:18:45 (20236): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032 2017-11-21 21:18:45 (20236): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=80 2017-11-21 21:18:45 (20236): Guest Log: BIOS: Boot from Hard Disk 0 failed 2017-11-21 21:18:45 (20236): Guest Log: BIOS: Boot : bseqnr=2, bootseq=0003 2017-11-21 21:18:45 (20236): Guest Log: BIOS: Booting from CD-ROM... 2017-11-21 21:19:05 (20236): Guest Log: BIOS: KBD: unsupported int 16h function 03 2017-11-21 21:19:05 (20236): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 2017-11-21 21:19:25 (20236): Guest Log: net.ipv4.ip_forward = 1 2017-11-21 21:19:25 (20236): Guest Log: sysctl: cannot stat /proc/sys/net/ipv6/conf/all/forwarding: No such file or directory 2017-11-21 21:19:25 (20236): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory 2017-11-21 21:19:25 (20236): Guest Log: sysctl: "cannot stat %s" is an unknown key 2017-11-21 21:19:25 (20236): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory 2017-11-21 21:19:25 (20236): Guest Log: Segmentation fault 2017-11-21 21:19:26 (20236): Guest Log: automount ... 2017-11-21 21:19:26 (20236): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds 2017-11-21 21:19:26 (20236): Guest Log: vboxguest: misc device minor 56, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000) 2017-11-21 21:19:26 (20236): Guest Log: Is the disk unpartitioned?, test for the 'boot2docker format-me' string 2017-11-21 21:19:27 (20236): Guest Log: automount over. 2017-11-21 21:19:27 (20236): Guest Log: [1;32mSetting hostname to [1;35mboot2docker[0;39m [1;32mDone.[0;39m 2017-11-21 21:19:27 (20236): Guest Log: Tue Nov 21 21:19:24 UTC 2017 dhcp ------------------------------- 2017-11-21 21:19:31 (20236): Guest Log: udevadm settle - timeout of 5 seconds reached, the event queue contains: 2017-11-21 21:19:31 (20236): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/input/input6 (1286) 2017-11-21 21:19:31 (20236): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/input/input6/event5 (1287) 2017-11-21 21:19:31 (20236): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:00 (1290) 2017-11-21 21:19:31 (20236): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP8390:00 (1296) 2017-11-21 21:19:31 (20236): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0100:00 (1300) 2017-11-21 21:19:31 (20236): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0200:00 (1302) 2017-11-21 21:19:32 (20236): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0303:00 (1303) 2017-11-21 21:19:32 (20236): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1304) 2017-11-21 21:19:32 (20236): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0B00:00 (1305) 2017-11-21 21:19:32 (20236): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0F03:00 (1306) 2017-11-21 21:19:32 (20236): Guest Log: /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:01 (1309) 2017-11-21 21:19:32 (20236): Guest Log: Tue Nov 21 21:19:31 UTC 2017 dhcp ------------------------------- 2017-11-21 21:19:33 (20236): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar 4 2016 17:38:55) release log 2017-11-21 21:19:33 (20236): Guest Log: 00:00:00.000108 main Log opened 2017-11-21T21:19:31.160756000Z 2017-11-21 21:19:33 (20236): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar 4 2016 17:38:55) release log 2017-11-21 21:19:33 (20236): Guest Log: 00:00:00.000108 main Log opened 2017-11-21T21:19:31.160756000Z 2017-11-21 21:19:33 (20236): Guest Log: 00:00:00.003227 main OS Product: Linux 2017-11-21 21:19:33 (20236): Guest Log: 00:00:00.003227 main OS Product: Linux 2017-11-21 21:19:33 (20236): Guest Log: 00:00:00.004254 main OS Release: 4.1.19-boot2docker 2017-11-21 21:19:33 (20236): Guest Log: 00:00:00.004310 main OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016 2017-11-21 21:19:33 (20236): Guest Log: 00:00:00.004359 main Executable: /sbin/VBoxService 2017-11-21 21:19:33 (20236): Guest Log: 00:00:00.004361 main Process ID: 809 2017-11-21 21:19:33 (20236): Guest Log: 00:00:00.004362 main Package type: LINUX_64BITS_GENERIC 2017-11-21 21:19:33 (20236): Guest Log: 00:00:00.004254 main OS Release: 4.1.19-boot2docker 2017-11-21 21:19:33 (20236): Guest Log: 00:00:00.004310 main OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016 2017-11-21 21:19:33 (20236): Guest Log: 00:00:00.004359 main Executable: /sbin/VBoxService 2017-11-21 21:19:33 (20236): Guest Log: 00:00:00.004361 main Process ID: 809 2017-11-21 21:19:33 (20236): Guest Log: 00:00:00.004362 main Package type: LINUX_64BITS_GENERIC 2017-11-21 21:19:33 (20236): Guest Log: 00:00:00.010660 main 5.0.16 r105871 started. Verbose level = 0 2017-11-21 21:19:33 (20236): Guest Log: 00:00:00:00:00.014982 vminfo rtldrNativeLoad: dlopen('libdbus-1.so.3', RTLD_NOW | RTLD_LOCAL) failed: libdbus-1.so.3: cannot open shared object file: No such file or directory 2017-11-21 21:19:33 (20236): Guest Log: 00:00:00.015056 vminfo Error: Unable to connect to system D-Bus (1/3): D-Bus not installed 2017-11-21 21:19:33 (20236): Guest Log: 00.010660 main 5.0.16 r105871 started. Verbose level = 0 2017-11-21 21:19:33 (20236): Guest Log: Mounting BOINC shared/... 2017-11-21 21:19:33 (20236): Guest Log: ------------------- 2017-11-21 21:19:33 (20236): Guest Log: Wed Nov 22 02:19:33 UTC 2017 2017-11-21 21:19:38 (20236): Guest Log: 00:00:05.015732 vminfo Error: Unable to connect to system D-Bus (2/3): D-Bus not installed 2017-11-21 21:19:38 (20236): Guest Log: Wed Nov 22 02:21:56 UTC 2017 2017-11-21 21:19:38 (20236): Guest Log: 1: lo: <LOOPBACK,UP,LOWER_UP> mtu 65536 qdisc noqueue state UNKNOWN group default 2017-11-21 21:19:38 (20236): Guest Log: link/loopback 00:00:00:00:00:00 brd 00:00:00:00:00:00 2017-11-21 21:19:38 (20236): Guest Log: inet 127.0.0.1/8 scope host lo 2017-11-21 21:19:38 (20236): Guest Log: valid_lft forever preferred_lft forever 2017-11-21 21:19:38 (20236): Guest Log: inet6 ::1/128 scope host 2017-11-21 21:19:38 (20236): Guest Log: valid_lft forever preferred_lft forever 2017-11-21 21:19:38 (20236): Guest Log: 2: dummy0: <BROADCAST,NOARP> mtu 1500 qdisc noop state DOWN group default 2017-11-21 21:19:38 (20236): Guest Log: link/ether 2e:7c:44:15:3f:c6 brd ff:ff:ff:ff:ff:ff 2017-11-21 21:19:38 (20236): Guest Log: 3: eth0: <BROADCAST,MULTICAST,UP,LOWER_UP> mtu 1500 qdisc pfifo_fast state UP group default qlen 1000 2017-11-21 21:19:38 (20236): Guest Log: link/ether 08:00:27:a9:b3:51 brd ff:ff:ff:ff:ff:ff 2017-11-21 21:19:38 (20236): Guest Log: inet 10.0.2.15/24 brd 10.0.2.255 scope global eth0 2017-11-21 21:19:38 (20236): Guest Log: valid_lft forever preferred_lft forever 2017-11-21 21:19:38 (20236): Guest Log: inet6 fe80::a00:27ff:fea9:b351/64 scope link 2017-11-21 21:19:38 (20236): Guest Log: valid_lft forever preferred_lft forever 2017-11-21 21:19:38 (20236): Guest Log: ------------------- 2017-11-21 21:19:38 (20236): Guest Log: Linking /etc/docker to /var/lib/boot2docker for persistence 2017-11-21 21:19:38 (20236): Guest Log: Waiting for Docker daemon to start... 2017-11-21 21:19:39 (20236): Guest Log: REPOSITORY TAG IMAGE ID CREATED SIZE 2017-11-21 21:19:39 (20236): Guest Log: Running boinc_app... 2017-11-21 21:19:39 (20236): Guest Log: Importing Docker image from BOINC... 2017-11-21 21:19:39 (20236): Guest Log: Filesystem Size Used Available Use% Mounted on 2017-11-21 21:19:39 (20236): Guest Log: tmpfs 2.6G 164.2M 2.5G 6% / 2017-11-21 21:19:39 (20236): Guest Log: tmpfs 1.5G 0 1.5G 0% /dev/shm 2017-11-21 21:19:39 (20236): Guest Log: cgroup 1.5G 0 1.5G 0% /sys/fs/cgroup 2017-11-21 21:19:39 (20236): Guest Log: shared 1.8T 243.5G 1.6T 13% /root/shared 2017-11-21 21:19:39 (20236): Guest Log: tmpfs 2.6G 164.2M 2.5G 6% /var/lib/docker/aufs 2017-11-21 21:19:43 (20236): Guest Log: 00:00:10.059290 vminfo Error: Unable to connect to system D-Bus (3/3): D-Bus not installed 2017-11-21 21:20:11 (20236): Guest Log: doing docker load... 2017-11-21 21:20:53 (20236): Guest Log: Filesystem Size Used Available Use% Mounted on 2017-11-21 21:20:53 (20236): Guest Log: tmpfs 2.6G 651.5M 2.0G 24% / 2017-11-21 21:20:53 (20236): Guest Log: tmpfs 1.5G 0 1.5G 0% /dev/shm 2017-11-21 21:20:53 (20236): Guest Log: cgroup 1.5G 0 1.5G 0% /sys/fs/cgroup 2017-11-21 21:20:53 (20236): Guest Log: shared 1.8T 241.7G 1.6T 13% /root/shared 2017-11-21 21:20:53 (20236): Guest Log: tmpfs 2.6G 651.5M 2.0G 24% /var/lib/docker/aufs 2017-11-21 21:20:53 (20236): Guest Log: total used free shared buff/cache available 2017-11-21 21:20:53 (20236): Guest Log: Mem: 3007 49 2267 651 689 2268 2017-11-21 21:20:53 (20236): Guest Log: Swap: 702 0 702 2017-11-21 21:20:53 (20236): Guest Log: Building apps directory... 2017-11-21 21:21:15 (20236): Guest Log: tar xf /root/shared/appsSource/rappture_grid_tag_1.7.2-6645-2077.tar --directory /root/shared/apps/share64/debian7/rappture/grid 2017-11-21 21:21:26 (20236): Guest Log: tar xf /root/shared/appsSource/rappture_grid_tag_1.7.2-6645-2077_links.tar --directory /root/shared/apps/share64/debian7/rappture/grid 2017-11-21 21:21:27 (20236): Guest Log: mv /root/shared/appsSource/rappture /root/shared/apps/share64/debian7/environ.d 2017-11-21 21:25:44 (20236): Guest Log: Prerun diagnostics... 2017-11-21 21:25:45 (20236): Guest Log: REPOSITORY TAG IMAGE ID CREATED SIZE 2017-11-21 21:25:45 (20236): Guest Log: nanohub_apps_share64_matlab 4 dd077e9bdfac 32 hours ago 476.7 MB 2017-11-21 21:25:45 (20236): Guest Log: CONTAINER ID IMAGE COMMAND CREATED STATUS PORTS NAMES 2017-11-21 21:25:45 (20236): Guest Log: 487.4M /var/lib/docker 2017-11-21 21:25:45 (20236): Guest Log: total used free shared buff/cache available 2017-11-21 21:25:45 (20236): Guest Log: Mem: 3007 50 2252 651 704 2265 2017-11-21 21:25:45 (20236): Guest Log: Swap: 702 0 702 2017-11-21 21:25:45 (20236): Guest Log: Filesystem Size Used Available Use% Mounted on 2017-11-21 21:25:45 (20236): Guest Log: tmpfs 2.6G 651.5M 2.0G 24% / 2017-11-21 21:25:45 (20236): Guest Log: tmpfs 1.5G 0 1.5G 0% /dev/shm 2017-11-21 21:25:45 (20236): Guest Log: cgroup 1.5G 0 1.5G 0% /sys/fs/cgroup 2017-11-21 21:25:45 (20236): Guest Log: shared 1.8T 245.4G 1.6T 13% /root/shared 2017-11-21 21:25:45 (20236): Guest Log: tmpfs 2.6G 651.5M 2.0G 24% /var/lib/docker/aufs 2017-11-21 21:25:45 (20236): Guest Log: Running... 2017-11-21 21:25:46 (20236): Guest Log: 00335685_01.boinc 2017-11-21 21:25:46 (20236): Guest Log: 00335685_01.sh 2017-11-21 21:25:46 (20236): Guest Log: + exitStatus=0 2017-11-21 21:25:46 (20236): Guest Log: + ./00335685_01.sh 2017-11-21 21:26:51 (20236): Guest Log: + exitStatus=0 2017-11-21 21:26:51 (20236): Guest Log: + [ -s 00335685_01_output.tar.gz ] 2017-11-21 21:26:51 (20236): Guest Log: + [ -f boinc_00335685_01.stdout ] 2017-11-21 21:26:51 (20236): Guest Log: + tar rf 00335685_01_output.tar boinc_00335685_01.stdout 2017-11-21 21:26:51 (20236): Guest Log: + [ 0 -ne 0 ] 2017-11-21 21:26:51 (20236): Guest Log: + [ -f boinc_00335685_01.stderr ] 2017-11-21 21:26:51 (20236): Guest Log: + tar rf 00335685_01_output.tar boinc_00335685_01.stderr 2017-11-21 21:26:51 (20236): Guest Log: + [ 0 -ne 0 ] 2017-11-21 21:26:51 (20236): Guest Log: + [ -f 00335685_01_output.tar ] 2017-11-21 21:26:51 (20236): Guest Log: + gzip --force 00335685_01_output.tar 2017-11-21 21:26:51 (20236): Guest Log: + [ 0 -ne 0 ] 2017-11-21 21:26:51 (20236): Guest Log: + exit 0 2017-11-21 21:26:51 (20236): Guest Log: boinc_app exited (0) 2017-11-21 21:26:51 (20236): Guest Log: Saving results... 2017-11-21 21:26:51 (20236): Guest Log: 00335685_01_output.tar.gz 2017-11-21 21:26:51 (20236): VM Completion File Detected. 2017-11-21 21:26:51 (20236): Powering off VM. 2017-11-21 21:26:51 (20236): Successfully stopped VM. 2017-11-21 21:26:51 (20236): Deregistering VM. (boinc_6f8cae517f6bc9d7, slot#1) 2017-11-21 21:26:51 (20236): Removing network bandwidth throttle group from VM. 2017-11-21 21:26:52 (20236): Removing storage controller(s) from VM. 2017-11-21 21:26:52 (20236): Removing VM from VirtualBox. 2017-11-21 21:26:52 (20236): Removing virtual ISO 9660 disk from VirtualBox. 21:26:57 (20236): called boinc_finish(0) </stderr_txt> ]]>
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