Task 7341

Name 00335651_01_0
Workunit 4226
Created 21 Nov 2017, 13:22:25 UTC
Sent 21 Nov 2017, 13:26:02 UTC
Report deadline 21 Nov 2017, 21:26:02 UTC
Received 21 Nov 2017, 13:51:05 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 13
Run time 11 min 7 sec
CPU time 3 min 53 sec
Validate state Valid
Credit 3.37
Device peak FLOPS 2.47 GFLOPS
Application version boinc2docker v1.11 (vbox64_mt)
x86_64-pc-linux-gnu
Peak working set size 94.42 MB
Peak swap size 3.33 GB
Peak disk usage 2.35 GB

Stderr output

<core_client_version>7.4.23</core_client_version>
<![CDATA[
<stderr_txt>
2017-11-21 08:37:28 (28780): vboxwrapper (7.7.26197): starting
2017-11-21 08:37:28 (28780): Feature: Checkpoint interval offset (387 seconds)
2017-11-21 08:37:28 (28780): Detected: VirtualBox VboxManage Interface (Version: 5.1.8)
2017-11-21 08:37:28 (28780): Detected: Minimum checkpoint interval (600.000000 seconds)
2017-11-21 08:37:29 (28780): Create VM. (boinc_0dc1190d90ed3bda, slot#13)
2017-11-21 08:37:29 (28780): Updating drive controller type and model for desired configuration.
2017-11-21 08:37:30 (28780): Setting Memory Size for VM. (3072MB)
2017-11-21 08:37:30 (28780): Setting CPU Count for VM. (1)
2017-11-21 08:37:31 (28780): Setting Chipset Options for VM.
2017-11-21 08:37:31 (28780): Setting Boot Options for VM.
2017-11-21 08:37:31 (28780): Setting Network Configuration for NAT.
2017-11-21 08:37:31 (28780): Enabling VM Network Access.
2017-11-21 08:37:31 (28780): Disabling USB Support for VM.
2017-11-21 08:37:32 (28780): Disabling COM Port Support for VM.
2017-11-21 08:37:32 (28780): Disabling LPT Port Support for VM.
2017-11-21 08:37:32 (28780): Disabling Audio Support for VM.
2017-11-21 08:37:32 (28780): Disabling Clipboard Support for VM.
2017-11-21 08:37:33 (28780): Disabling Drag and Drop Support for VM.
2017-11-21 08:37:33 (28780): Adding storage controller(s) to VM.
2017-11-21 08:37:33 (28780): Adding virtual ISO 9660 disk drive to VM. (vm_isocontext.iso)
2017-11-21 08:37:33 (28780): Adding VirtualBox Guest Additions to VM.
2017-11-21 08:37:33 (28780): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2017-11-21 08:37:34 (28780): Enabling shared directory for VM.
2017-11-21 08:37:34 (28780): Starting VM. (boinc_0dc1190d90ed3bda, slot#13)
2017-11-21 08:37:35 (28780): Successfully started VM. (PID = '29307')
2017-11-21 08:37:35 (28780): Reporting VM Process ID to BOINC.
2017-11-21 08:37:35 (28780): Guest Log: BIOS: VirtualBox 5.1.8
2017-11-21 08:37:35 (28780): VM state change detected. (old = 'poweroff', new = 'running')
2017-11-21 08:37:36 (28780): Preference change detected
2017-11-21 08:37:36 (28780): Setting CPU throttle for VM. (40%)
2017-11-21 08:37:36 (28780): Setting checkpoint interval to 600 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 600 seconds))
2017-11-21 08:37:38 (28780): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2017-11-21 08:37:38 (28780): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=80
2017-11-21 08:37:38 (28780): Guest Log: BIOS: Boot from Hard Disk 0 failed
2017-11-21 08:37:38 (28780): Guest Log: BIOS: Boot : bseqnr=2, bootseq=0003
2017-11-21 08:37:38 (28780): Guest Log: BIOS: Booting from CD-ROM...
2017-11-21 08:37:39 (28780): Guest Log: BIOS: KBD: unsupported int 16h function 03
2017-11-21 08:37:39 (28780): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2017-11-21 08:38:03 (28780): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2017-11-21 08:38:03 (28780): Guest Log: vboxguest: misc device minor 56, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2017-11-21 08:38:03 (28780): Guest Log: net.ipv4.ip_forward = 1
2017-11-21 08:38:03 (28780): Guest Log: sysctl: cannot stat /proc/sys/net/ipv6/conf/all/forwarding: No such file or directory
2017-11-21 08:38:03 (28780): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2017-11-21 08:38:03 (28780): Guest Log: sysctl: "cannot stat %s" is an unknown key
2017-11-21 08:38:03 (28780): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2017-11-21 08:38:03 (28780): Guest Log: Segmentation fault
2017-11-21 08:38:03 (28780): Guest Log: automount ...
2017-11-21 08:38:03 (28780): Guest Log: Is the disk unpartitioned?, test for the 'boot2docker format-me' string
2017-11-21 08:38:03 (28780): Guest Log: automount over.
2017-11-21 08:38:03 (28780): Guest Log: Setting hostname to boot2docker Done.
2017-11-21 08:38:04 (28780): Guest Log: Tue Nov 21 08:38:01 UTC 2017 dhcp -------------------------------
2017-11-21 08:38:09 (28780): Guest Log: udevadm settle - timeout of 5 seconds reached, the event queue contains:
2017-11-21 08:38:09 (28780): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/input/input6 (1318)
2017-11-21 08:38:09 (28780): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/input/input6/event5 (1319)
2017-11-21 08:38:09 (28780): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0400:01 (1321)
2017-11-21 08:38:09 (28780): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:03 (1325)
2017-11-21 08:38:09 (28780): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0C0A:00 (1327)
2017-11-21 08:38:09 (28780): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/APP0001:00 (1330)
2017-11-21 08:38:09 (28780): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0100:00 (1332)
2017-11-21 08:38:09 (28780): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0200:00 (1334)
2017-11-21 08:38:09 (28780): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1336)
2017-11-21 08:38:09 (28780): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0F03:00 (1338)
2017-11-21 08:38:10 (28780): Guest Log: Tue Nov 21 08:38:07 UTC 2017 dhcp -------------------------------
2017-11-21 08:38:10 (28780): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2017-11-21 08:38:10 (28780): Guest Log: 00:00:00.000098 main     Log opened 2017-11-21T08:38:07.422755000Z
2017-11-21 08:38:10 (28780): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2017-11-21 08:38:10 (28780): Guest Log: 00:00:00.000098 main     Log opened 2017-11-21T08:38:07.422755000Z
2017-11-21 08:38:10 (28780): Guest Log: 00:00:00.002793 main     OS Product: Linux
2017-11-21 08:38:10 (28780): Guest Log: 00:00:00.002793 main     OS Product: Linux
2017-11-21 08:38:10 (28780): Guest Log: 00:00:00.003751 main     OS Release: 4.1.19-boot2docker
2017-11-21 08:38:10 (28780): Guest Log: 00:00:00.003809 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2017-11-21 08:38:10 (28780): Guest Log: 00:00:00.003857 main     Executable: /sbin/VBoxService
2017-11-21 08:38:10 (28780): Guest Log: 00:00:00.003859 main     Process ID: 841
2017-11-21 08:38:10 (28780): Guest Log: 00:00:00.003860 main     Package type: LINUX_64BITS_GENERIC
2017-11-21 08:38:10 (28780): Guest Log: 00:00:00.003751 main     OS Release: 4.1.19-boot2docker
2017-11-21 08:38:10 (28780): Guest Log: 00:00:00.003809 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2017-11-21 08:38:10 (28780): Guest Log: 00:00:00.003857 main     Executable: /sbin/VBoxService
2017-11-21 08:38:10 (28780): Guest Log: 00:00:00.003859 main     Process ID: 841
2017-11-21 08:38:10 (28780): Guest Log: 00:00:00.003860 main     Package type: LINUX_64BITS_GENERIC
2017-11-21 08:38:10 (28780): Guest Log: 00:00:00.011069 main     5.0.16 r105871 started. Verbose level = 0
2017-11-21 08:38:10 (28780): Guest Log: 00:00:00.011069 main     500:00:00.016006 vminfo   rtldrNativeLoad: dlopen('libdbus-1.so.3', RTLD_NOW | RTLD_LOCAL) failed: libdbus-1.so.3: cannot open shared object file: No such file or directory
2017-11-21 08:38:10 (28780): Guest Log: 00:00:00.016093 vminfo   Error: Unable to connect to system D-Bus (1/3): D-Bus not installed
2017-11-21 08:38:10 (28780): Guest Log: .0.16 r105871 started. Verbose level = 0
2017-11-21 08:38:10 (28780): Guest Log: Mounting BOINC shared/...
2017-11-21 08:38:10 (28780): Guest Log: -------------------
2017-11-21 08:38:10 (28780): Guest Log: Tue Nov 21 13:38:10 UTC 2017
2017-11-21 08:38:15 (28780): Guest Log: 00:00:05.016767 vminfo   Error: Unable to connect to system D-Bus (2/3): D-Bus not installed
2017-11-21 08:38:15 (28780): Guest Log: Tue Nov 21 13:38:15 UTC 2017
2017-11-21 08:38:15 (28780): Guest Log: 1: lo: <LOOPBACK,UP,LOWER_UP> mtu 65536 qdisc noqueue state UNKNOWN group default 
2017-11-21 08:38:15 (28780): Guest Log:     link/loopback 00:00:00:00:00:00 brd 00:00:00:00:00:00
2017-11-21 08:38:15 (28780): Guest Log:     inet 127.0.0.1/8 scope host lo
2017-11-21 08:38:15 (28780): Guest Log:        valid_lft forever preferred_lft forever
2017-11-21 08:38:15 (28780): Guest Log: 2: dummy0: <BROADCAST,NOARP> mtu 1500 qdisc noop state DOWN group default 
2017-11-21 08:38:15 (28780): Guest Log:     link/ether 26:01:34:42:36:54 brd ff:ff:ff:ff:ff:ff
2017-11-21 08:38:15 (28780): Guest Log: 3: eth0: <BROADCAST,MULTICAST,UP,LOWER_UP> mtu 1500 qdisc pfifo_fast state UP group default qlen 1000
2017-11-21 08:38:15 (28780): Guest Log:     link/ether 08:00:27:4b:c0:c5 brd ff:ff:ff:ff:ff:ff
2017-11-21 08:38:15 (28780): Guest Log:     inet 10.0.2.15/24 brd 10.0.2.255 scope global eth0
2017-11-21 08:38:15 (28780): Guest Log:        valid_lft forever preferred_lft forever
2017-11-21 08:38:15 (28780): Guest Log: -------------------
2017-11-21 08:38:15 (28780): Guest Log: Linking /etc/docker to /var/lib/boot2docker for persistence
2017-11-21 08:38:15 (28780): Guest Log: Waiting for Docker daemon to start...
2017-11-21 08:38:16 (28780): Guest Log: REPOSITORY          TAG                 IMAGE ID            CREATED             SIZE
2017-11-21 08:38:16 (28780): Guest Log: Running boinc_app...
2017-11-21 08:38:16 (28780): Guest Log: Importing Docker image from BOINC...
2017-11-21 08:38:16 (28780): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2017-11-21 08:38:16 (28780): Guest Log: tmpfs                     2.6G    164.1M      2.5G   6% /
2017-11-21 08:38:16 (28780): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2017-11-21 08:38:16 (28780): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2017-11-21 08:38:16 (28780): Guest Log: shared                    1.8T    248.2G      1.5T  14% /root/shared
2017-11-21 08:38:16 (28780): Guest Log: tmpfs                     2.6G    164.1M      2.5G   6% /var/lib/docker/aufs
2017-11-21 08:38:20 (28780): Guest Log: 00:00:10.054717 vminfo   Error: Unable to connect to system D-Bus (3/3): D-Bus not installed
2017-11-21 08:38:41 (28780): Guest Log: doing docker load...
2017-11-21 08:39:09 (28780): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2017-11-21 08:39:09 (28780): Guest Log: tmpfs                     2.6G    619.1M      2.0G  23% /
2017-11-21 08:39:09 (28780): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2017-11-21 08:39:09 (28780): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2017-11-21 08:39:09 (28780): Guest Log: shared                    1.8T    248.1G      1.5T  14% /root/shared
2017-11-21 08:39:09 (28780): Guest Log: tmpfs                     2.6G    619.1M      2.0G  23% /var/lib/docker/aufs
2017-11-21 08:39:09 (28780): Guest Log:               total        used        free      shared  buff/cache   available
2017-11-21 08:39:09 (28780): Guest Log: Mem:           3007          51        2299         619         656        2299
2017-11-21 08:39:09 (28780): Guest Log: Swap:           699           0         699
2017-11-21 08:39:09 (28780): Guest Log: Building apps directory...
2017-11-21 08:39:17 (28780): Guest Log: tar xf /root/shared/appsSource/rappture_grid_tag_1.7.2-6645-2077.tar --directory /root/shared/apps/share64/debian7/rappture/grid
2017-11-21 08:39:27 (28780): Guest Log: tar xf /root/shared/appsSource/rappture_grid_tag_1.7.2-6645-2077_links.tar --directory /root/shared/apps/share64/debian7/rappture/grid
2017-11-21 08:39:27 (28780): Guest Log: mv /root/shared/appsSource/rappture /root/shared/apps/share64/debian7/environ.d
2017-11-21 08:47:07 (28780): Guest Log: Prerun diagnostics...
2017-11-21 08:47:07 (28780): Guest Log: REPOSITORY          TAG                 IMAGE ID            CREATED             SIZE
2017-11-21 08:47:07 (28780): Guest Log: nanohub_apps_base   11                  a3831bfe0ebe        4 days ago          445.4 MB
2017-11-21 08:47:07 (28780): Guest Log: CONTAINER ID        IMAGE               COMMAND             CREATED             STATUS              PORTS               NAMES
2017-11-21 08:47:07 (28780): Guest Log: 455.0M	/var/lib/docker
2017-11-21 08:47:07 (28780): Guest Log:               total        used        free      shared  buff/cache   available
2017-11-21 08:47:07 (28780): Guest Log: Mem:           3007          50        2288         619         668        2297
2017-11-21 08:47:07 (28780): Guest Log: Swap:           699           0         699
2017-11-21 08:47:07 (28780): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2017-11-21 08:47:07 (28780): Guest Log: tmpfs                     2.6G    619.1M      2.0G  23% /
2017-11-21 08:47:07 (28780): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2017-11-21 08:47:07 (28780): Guest Log: shared                    1.8T    248.0G      1.5T  14% /root/shared
2017-11-21 08:47:07 (28780): Guest Log: tmpfs                     2.6G    619.1M      2.0G  23% /var/lib/docker/aufs
2017-11-21 08:47:07 (28780): Guest Log: Running... 
2017-11-21 08:47:07 (28780): Guest Log: 00335651_01.boinc
2017-11-21 08:47:07 (28780): Guest Log: 00335651_01.sh
2017-11-21 08:47:07 (28780): Guest Log: + exitStatus=0
2017-11-21 08:47:07 (28780): Guest Log: + ./00335651_01.sh
2017-11-21 08:48:26 (28780): Guest Log: + exitStatus=0
2017-11-21 08:48:26 (28780): Guest Log: + [ -f boinc_00335651_01.stdout ]
2017-11-21 08:48:26 (28780): Guest Log: + tar rf 00335651_01_output.tar boinc_00335651_01.stdout
2017-11-21 08:48:26 (28780): Guest Log: + [ 0 -ne 0 ]
2017-11-21 08:48:26 (28780): Guest Log: + [ -f boinc_00335651_01.stderr ]
2017-11-21 08:48:26 (28780): Guest Log: + tar rf 00335651_01_output.tar boinc_00335651_01.stderr
2017-11-21 08:48:26 (28780): Guest Log: + [ 0 -ne 0 ]
2017-11-21 08:48:26 (28780): Guest Log: + [ -f 00335651_01_output.tar ]
2017-11-21 08:48:26 (28780): Guest Log: + gzip --force 00335651_01_output.tar
2017-11-21 08:48:26 (28780): Guest Log: + [ 0 -ne 0 ]
2017-11-21 08:48:26 (28780): Guest Log: + exit 0
2017-11-21 08:48:26 (28780): Guest Log: boinc_app exited (0)
2017-11-21 08:48:26 (28780): Guest Log: Saving results...
2017-11-21 08:48:26 (28780): Guest Log: 00335651_01_output.tar.gz
2017-11-21 08:48:26 (28780): VM Completion File Detected.
2017-11-21 08:48:26 (28780): Powering off VM.
2017-11-21 08:48:27 (28780): Successfully stopped VM.
2017-11-21 08:48:27 (28780): Deregistering VM. (boinc_0dc1190d90ed3bda, slot#13)
2017-11-21 08:48:27 (28780): Removing network bandwidth throttle group from VM.
2017-11-21 08:48:28 (28780): Removing storage controller(s) from VM.
2017-11-21 08:48:28 (28780): Removing VM from VirtualBox.
2017-11-21 08:48:28 (28780): Removing virtual ISO 9660 disk from VirtualBox.
08:48:33 (28780): called boinc_finish(0)

</stderr_txt>
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