Task 7171

Name 00335486_01_0
Workunit 4064
Created 20 Nov 2017, 21:57:37 UTC
Sent 20 Nov 2017, 21:57:45 UTC
Report deadline 21 Nov 2017, 5:57:45 UTC
Received 20 Nov 2017, 22:02:55 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 5
Run time 4 min 41 sec
CPU time 3 min 8 sec
Validate state Valid
Credit 1.47
Device peak FLOPS 2.24 GFLOPS
Application version boinc2docker v1.11 (vbox64_mt)
x86_64-pc-linux-gnu
Peak working set size 93.68 MB
Peak swap size 3.57 GB
Peak disk usage 1.27 GB

Stderr output

<core_client_version>7.4.23</core_client_version>
<![CDATA[
<stderr_txt>
2017-11-20 16:58:02 (20272): vboxwrapper (7.7.26197): starting
2017-11-20 16:58:02 (20272): Feature: Checkpoint interval offset (31 seconds)
2017-11-20 16:58:02 (20272): Detected: VirtualBox VboxManage Interface (Version: 5.1.8)
2017-11-20 16:58:02 (20272): Detected: Minimum checkpoint interval (600.000000 seconds)
2017-11-20 16:58:03 (20272): Create VM. (boinc_8eed9989ed735f8a, slot#0)
2017-11-20 16:58:03 (20272): Updating drive controller type and model for desired configuration.
2017-11-20 16:58:11 (20272): Setting Memory Size for VM. (3072MB)
2017-11-20 16:58:11 (20272): Setting CPU Count for VM. (1)
2017-11-20 16:58:11 (20272): Setting Chipset Options for VM.
2017-11-20 16:58:11 (20272): Setting Boot Options for VM.
2017-11-20 16:58:11 (20272): Setting Network Configuration for NAT.
2017-11-20 16:58:11 (20272): Enabling VM Network Access.
2017-11-20 16:58:11 (20272): Disabling USB Support for VM.
2017-11-20 16:58:11 (20272): Disabling COM Port Support for VM.
2017-11-20 16:58:11 (20272): Disabling LPT Port Support for VM.
2017-11-20 16:58:11 (20272): Disabling Audio Support for VM.
2017-11-20 16:58:11 (20272): Disabling Clipboard Support for VM.
2017-11-20 16:58:11 (20272): Disabling Drag and Drop Support for VM.
2017-11-20 16:58:11 (20272): Adding storage controller(s) to VM.
2017-11-20 16:58:11 (20272): Adding virtual ISO 9660 disk drive to VM. (vm_isocontext.iso)
2017-11-20 16:58:11 (20272): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2017-11-20 16:58:11 (20272): Enabling shared directory for VM.
2017-11-20 16:58:11 (20272): Starting VM. (boinc_8eed9989ed735f8a, slot#0)
2017-11-20 16:58:13 (20272): Successfully started VM. (PID = '20797')
2017-11-20 16:58:13 (20272): Reporting VM Process ID to BOINC.
2017-11-20 16:58:13 (20272): Guest Log: BIOS: VirtualBox 5.1.8
2017-11-20 16:58:13 (20272): VM state change detected. (old = 'poweroff', new = 'running')
2017-11-20 16:58:13 (20272): Preference change detected
2017-11-20 16:58:13 (20272): Setting CPU throttle for VM. (75%)
2017-11-20 16:58:13 (20272): Setting checkpoint interval to 600 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 600 seconds))
2017-11-20 16:58:15 (20272): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2017-11-20 16:58:15 (20272): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=80
2017-11-20 16:58:15 (20272): Guest Log: BIOS: Boot from Hard Disk 0 failed
2017-11-20 16:58:15 (20272): Guest Log: BIOS: Boot : bseqnr=2, bootseq=0003
2017-11-20 16:58:15 (20272): Guest Log: BIOS: Booting from CD-ROM...
2017-11-20 16:58:16 (20272): Guest Log: BIOS: KBD: unsupported int 16h function 03
2017-11-20 16:58:16 (20272): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2017-11-20 16:58:33 (20272): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2017-11-20 16:58:33 (20272): Guest Log: vboxguest: misc device minor 56, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2017-11-20 16:58:36 (20272): Guest Log: net.ipv4.ip_forward = 1
2017-11-20 16:58:36 (20272): Guest Log: sysctl: cannot stat /proc/sys/net/ipv6/conf/all/forwarding: No such file or directory
2017-11-20 16:58:36 (20272): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2017-11-20 16:58:36 (20272): Guest Log: sysctl: "cannot stat %s" is an unknown key
2017-11-20 16:58:36 (20272): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2017-11-20 16:58:36 (20272): Guest Log: Segmentation fault
2017-11-20 16:58:37 (20272): Guest Log: automount ...
2017-11-20 16:58:37 (20272): Guest Log: Is the disk unpartitioned?, test for the 'boot2docker format-me' string
2017-11-20 16:58:37 (20272): Guest Log: automount over.
2017-11-20 16:58:38 (20272): Guest Log: Setting hostname to boot2docker Done.
2017-11-20 16:58:38 (20272): Guest Log: Mon Nov 20 16:58:35 UTC 2017 dhcp -------------------------------
2017-11-20 16:58:43 (20272): Guest Log: udevadm settle - timeout of 5 seconds reached, the event queue contains:
2017-11-20 16:58:43 (20272): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSLPBN:00/input/input1 (1288)
2017-11-20 16:58:43 (20272): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSLPBN:00/input/input1/event1 (1289)
2017-11-20 16:58:43 (20272): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/input/input7 (1296)
2017-11-20 16:58:43 (20272): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/input/input7/event6 (1297)
2017-11-20 16:58:43 (20272): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0400:00 (1298)
2017-11-20 16:58:43 (20272): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0400:01 (1299)
2017-11-20 16:58:43 (20272): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:00 (1300)
2017-11-20 16:58:43 (20272): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:01 (1301)
2017-11-20 16:58:43 (20272): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:02 (1302)
2017-11-20 16:58:43 (20272): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0501:03 (1303)
2017-11-20 16:58:43 (20272): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0C02:00 (1304)
2017-11-20 16:58:43 (20272): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0C0A:00 (1305)
2017-11-20 16:58:43 (20272): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP8390:00 (1306)
2017-11-20 16:58:43 (20272): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/APP0001:00 (1308)
2017-11-20 16:58:43 (20272): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0000:00 (1309)
2017-11-20 16:58:43 (20272): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0100:00 (1310)
2017-11-20 16:58:43 (20272): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0103:00 (1311)
2017-11-20 16:58:43 (20272): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0200:00 (1312)
2017-11-20 16:58:43 (20272): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0303:00 (1313)
2017-11-20 16:58:43 (20272): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1314)
2017-11-20 16:58:43 (20272): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0B00:00 (1315)
2017-11-20 16:58:43 (20272): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0F03:00 (1316)
2017-11-20 16:58:43 (20272): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:00 (1318)
2017-11-20 16:58:43 (20272): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:02 (1320)
2017-11-20 16:58:43 (20272): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0C0F:03 (1321)
2017-11-20 16:58:44 (20272): Guest Log: Mon Nov 20 16:58:41 UTC 2017 dhcp -------------------------------
2017-11-20 16:58:45 (20272): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2017-11-20 16:58:45 (20272): Guest Log: 00:00:00.000679 main     Log opened 2017-11-20T16:58:42.201528000Z
2017-11-20 16:58:45 (20272): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2017-11-20 16:58:45 (20272): Guest Log: 00:00:00.000679 main     Log opened 2017-11-20T16:58:42.201528000Z
2017-11-20 16:58:45 (20272): Guest Log: 00:00:00.006622 main     OS Product: Linux
2017-11-20 16:58:45 (20272): Guest Log: 00:00:00.006694 main     OS Release: 4.1.19-boot2docker
2017-11-20 16:58:45 (20272): Guest Log: 00:00:00.006753 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2017-11-20 16:58:45 (20272): Guest Log: 00:00:00.006810 main     Executable: /sbin/VBoxService
2017-11-20 16:58:45 (20272): Guest Log: 00:00:00.006812 main     Process ID: 762
2017-11-20 16:58:45 (20272): Guest Log: 00:00:00.006813 main     Package type: LINUX_64BITS_GENERIC
2017-11-20 16:58:45 (20272): Guest Log: 000:00:00.007744 main     5.0.16 r105871 started. Verbose level = 0
2017-11-20 16:58:45 (20272): Guest Log: 0:00:00.006622 main     OS Product: Linux
2017-11-20 16:58:45 (20272): Guest Log: 00:00:00.006694 main     OS Release: 4.1.19-boot2docker
2017-11-20 16:58:45 (20272): Guest Log: 00:00:00.006753 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2017-11-20 16:58:45 (20272): Guest Log: 00:00:00.006810 main     Executable: /sbin/VBoxService
2017-11-20 16:58:45 (20272): Guest Log: 00:00:00.006812 main     Process ID: 762
2017-11-20 16:58:45 (20272): Guest Log: 00:00:00.006813 m00:00:00.075100 vminfo   rtldrNativeLoad: dlopen('libdbus-1.so.3', RTLD_NOW | RTLD_LOCAL) failed: libdbus-1.so.3: cannot open shared object file: No such file or directory
2017-11-20 16:58:45 (20272): Guest Log: 00:00:00.075195 vminfo   Error: Unable to connect to system D-Bus (1/3): D-Bus not installed
2017-11-20 16:58:45 (20272): Guest Log: ain     Package type: LINUX_64BITS_GENERIC
2017-11-20 16:58:45 (20272): Guest Log: 00:00:00.007744 main     5.0.16 r105871 started. Verbose level = 0
2017-11-20 16:58:45 (20272): Guest Log: Mounting BOINC shared/...
2017-11-20 16:58:45 (20272): Guest Log: -------------------
2017-11-20 16:58:45 (20272): Guest Log: Mon Nov 20 21:58:45 UTC 2017
2017-11-20 16:58:50 (20272): Guest Log: 00:00:05.079515 vminfo   Error: Unable to connect to system D-Bus (2/3): D-Bus not installed
2017-11-20 16:58:50 (20272): Guest Log: Mon Nov 20 21:58:50 UTC 2017
2017-11-20 16:58:50 (20272): Guest Log: 1: lo: <LOOPBACK,UP,LOWER_UP> mtu 65536 qdisc noqueue state UNKNOWN group default 
2017-11-20 16:58:50 (20272): Guest Log:     link/loopback 00:00:00:00:00:00 brd 00:00:00:00:00:00
2017-11-20 16:58:50 (20272): Guest Log:     inet 127.0.0.1/8 scope host lo
2017-11-20 16:58:50 (20272): Guest Log:        valid_lft forever preferred_lft forever
2017-11-20 16:58:50 (20272): Guest Log: 2: dummy0: <BROADCAST,NOARP> mtu 1500 qdisc noop state DOWN group default 
2017-11-20 16:58:50 (20272): Guest Log:     link/ether de:ce:3a:44:2f:ed brd ff:ff:ff:ff:ff:ff
2017-11-20 16:58:51 (20272): Guest Log: 3: eth0: <BROADCAST,MULTICAST,UP,LOWER_UP> mtu 1500 qdisc pfifo_fast state UP group default qlen 1000
2017-11-20 16:58:51 (20272): Guest Log:     link/ether 08:00:27:eb:b2:84 brd ff:ff:ff:ff:ff:ff
2017-11-20 16:58:51 (20272): Guest Log:     inet 10.0.2.15/24 brd 10.0.2.255 scope global eth0
2017-11-20 16:58:51 (20272): Guest Log:        valid_lft forever preferred_lft forever
2017-11-20 16:58:51 (20272): Guest Log: -------------------
2017-11-20 16:58:51 (20272): Guest Log: Linking /etc/docker to /var/lib/boot2docker for persistence
2017-11-20 16:58:51 (20272): Guest Log: Waiting for Docker daemon to start...
2017-11-20 16:58:53 (20272): Guest Log: REPOSITORY          TAG                 IMAGE ID            CREATED             SIZE
2017-11-20 16:58:53 (20272): Guest Log: Running boinc_app...
2017-11-20 16:58:53 (20272): Guest Log: Importing Docker image from BOINC...
2017-11-20 16:58:53 (20272): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2017-11-20 16:58:53 (20272): Guest Log: tmpfs                     2.6G    164.1M      2.5G   6% /
2017-11-20 16:58:53 (20272): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2017-11-20 16:58:53 (20272): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2017-11-20 16:58:53 (20272): Guest Log: shared                  916.3G     65.6G    850.7G   7% /root/shared
2017-11-20 16:58:53 (20272): Guest Log: tmpfs                     2.6G    164.1M      2.5G   6% /var/lib/docker/aufs
2017-11-20 16:58:55 (20272): Guest Log: 00:00:10.080409 vminfo   Error: Unable to connect to system D-Bus (3/3): D-Bus not installed
2017-11-20 16:59:11 (20272): Guest Log: doing docker load...
2017-11-20 16:59:39 (20272): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2017-11-20 16:59:39 (20272): Guest Log: tmpfs                     2.6G    709.9M      1.9G  26% /
2017-11-20 16:59:39 (20272): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2017-11-20 16:59:39 (20272): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2017-11-20 16:59:39 (20272): Guest Log: shared                  916.3G     65.4G    850.9G   7% /root/shared
2017-11-20 16:59:39 (20272): Guest Log: tmpfs                     2.6G    709.9M      1.9G  26% /var/lib/docker/aufs
2017-11-20 16:59:39 (20272): Guest Log:               total        used        free      shared  buff/cache   available
2017-11-20 16:59:39 (20272): Guest Log: Mem:           3007          53        2203         709         749        2204
2017-11-20 16:59:39 (20272): Guest Log: Swap:           704           0         704
2017-11-20 16:59:39 (20272): Guest Log: Building apps directory...
2017-11-20 16:59:42 (20272): Guest Log: tar xf /root/shared/appsSource/rappture_grid_tag_1.7.2-6645-2077.tar --directory /root/shared/apps/share64/debian7/rappture/grid
2017-11-20 16:59:50 (20272): Guest Log: tar xf /root/shared/appsSource/rappture_grid_tag_1.7.2-6645-2077_links.tar --directory /root/shared/apps/share64/debian7/rappture/grid
2017-11-20 16:59:50 (20272): Guest Log: mv /root/shared/appsSource/rappture /root/shared/apps/share64/debian7/environ.d
2017-11-20 17:01:28 (20272): Guest Log: Prerun diagnostics...
2017-11-20 17:01:28 (20272): Guest Log: REPOSITORY                    TAG                 IMAGE ID            CREATED             SIZE
2017-11-20 17:01:28 (20272): Guest Log: nanohub_apps_share64_octave   5                   1d3a6e7f5928        3 hours ago         535.4 MB
2017-11-20 17:01:28 (20272): Guest Log: CONTAINER ID        IMAGE               COMMAND             CREATED             STATUS              PORTS               NAMES
2017-11-20 17:01:28 (20272): Guest Log: 545.8M	/var/lib/docker
2017-11-20 17:01:28 (20272): Guest Log:               total        used        free      shared  buff/cache   available
2017-11-20 17:01:28 (20272): Guest Log: Mem:           3007          54        2199         709         753        2203
2017-11-20 17:01:28 (20272): Guest Log: Swap:           704           0         704
2017-11-20 17:01:28 (20272): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2017-11-20 17:01:28 (20272): Guest Log: tmpfs                     2.6G    709.9M      1.9G  26% /
2017-11-20 17:01:28 (20272): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2017-11-20 17:01:28 (20272): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2017-11-20 17:01:28 (20272): Guest Log: shared                  916.3G     65.5G    850.8G   7% /root/shared
2017-11-20 17:01:28 (20272): Guest Log: tmpfs                     2.6G    709.9M      1.9G  26% /var/lib/docker/aufs
2017-11-20 17:01:28 (20272): Guest Log: Running... 
2017-11-20 17:01:29 (20272): Guest Log: 00335486_01.boinc
2017-11-20 17:01:29 (20272): Guest Log: 00335486_01.sh
2017-11-20 17:02:36 (20272): Guest Log: boinc_app exited (0)
2017-11-20 17:02:36 (20272): Guest Log: Saving results...
2017-11-20 17:02:36 (20272): Guest Log: 00335486_01_output.tar.gz
2017-11-20 17:02:37 (20272): VM Completion File Detected.
2017-11-20 17:02:37 (20272): Powering off VM.
2017-11-20 17:02:37 (20272): Successfully stopped VM.
2017-11-20 17:02:37 (20272): Deregistering VM. (boinc_8eed9989ed735f8a, slot#0)
2017-11-20 17:02:37 (20272): Removing network bandwidth throttle group from VM.
2017-11-20 17:02:37 (20272): Removing storage controller(s) from VM.
2017-11-20 17:02:37 (20272): Removing VM from VirtualBox.
2017-11-20 17:02:37 (20272): Removing virtual ISO 9660 disk from VirtualBox.
17:02:42 (20272): called boinc_finish(0)

</stderr_txt>
]]>


©2024 COPYRIGHT 2017 NCN