Task 3877

Name	boinc2docker_2618_1496786070.844402_0_1
Workunit	1719
Created	6 Jun 2017, 21:54:33 UTC
Sent	6 Jun 2017, 21:55:07 UTC
Report deadline	13 Jun 2017, 21:55:07 UTC
Received	6 Jun 2017, 23:00:28 UTC
Server state	Over
Outcome	Computation error
Client state	Compute error
Exit status	194 (0x000000C2) EXIT_ABORTED_BY_CLIENT
Computer ID	3
Run time	5 min 45 sec
CPU time	1 min 40 sec
Validate state	Invalid
Credit	0.00
Device peak FLOPS	2.24 GFLOPS
Application version	boinc2docker v1.10 (vbox64_mt) x86_64-pc-linux-gnu
Peak working set size	2.23 GB
Peak swap size	3.71 GB
Peak disk usage	276.02 MB
Stderr output

<core_client_version>7.4.23</core_client_version>
<![CDATA[
<stderr_txt>
2017-06-06 18:03:32 (9290): vboxwrapper (7.7.26197): starting
2017-06-06 18:03:32 (9290): Feature: Checkpoint interval offset (495 seconds)
2017-06-06 18:03:32 (9290): Detected: VirtualBox VboxManage Interface (Version: 4.3.36)
2017-06-06 18:03:32 (9290): Detected: Minimum checkpoint interval (600.000000 seconds)
2017-06-06 18:03:33 (9290): Create VM. (boinc_d3362460858bbaec, slot#9)
2017-06-06 18:03:33 (9290): Updating drive controller type and model for desired configuration.
2017-06-06 18:03:39 (9290): Setting Memory Size for VM. (3072MB)
2017-06-06 18:03:40 (9290): Setting CPU Count for VM. (1)
2017-06-06 18:03:40 (9290): Setting Chipset Options for VM.
2017-06-06 18:03:41 (9290): Setting Boot Options for VM.
2017-06-06 18:03:41 (9290): Setting Network Configuration for NAT.
2017-06-06 18:03:41 (9290): Enabling VM Network Access.
2017-06-06 18:03:42 (9290): Disabling USB Support for VM.
2017-06-06 18:03:42 (9290): Disabling COM Port Support for VM.
2017-06-06 18:03:42 (9290): Disabling LPT Port Support for VM.
2017-06-06 18:03:43 (9290): Disabling Audio Support for VM.
2017-06-06 18:03:43 (9290): Disabling Clipboard Support for VM.
2017-06-06 18:03:43 (9290): Disabling Drag and Drop Support for VM.
2017-06-06 18:03:44 (9290): Adding storage controller(s) to VM.
2017-06-06 18:03:44 (9290): Adding virtual ISO 9660 disk drive to VM. (vm_isocontext.iso)
2017-06-06 18:03:45 (9290): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2017-06-06 18:03:45 (9290): Enabling shared directory for VM.
2017-06-06 18:03:46 (9290): Starting VM. (boinc_d3362460858bbaec, slot#9)
2017-06-06 18:03:50 (9290): Successfully started VM. (PID = '10376')
2017-06-06 18:03:50 (9290): Reporting VM Process ID to BOINC.
2017-06-06 18:03:50 (9290): Guest Log: BIOS: VirtualBox 4.3.36
2017-06-06 18:03:50 (9290): VM state change detected. (old = 'poweroff', new = 'running')
2017-06-06 18:03:50 (9290): Preference change detected
2017-06-06 18:03:50 (9290): Setting CPU throttle for VM. (100%)
2017-06-06 18:03:57 (9290): Setting checkpoint interval to 600 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 600 seconds))
2017-06-06 18:03:57 (9290): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2017-06-06 18:03:57 (9290): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=80
2017-06-06 18:03:57 (9290): Guest Log: BIOS: Boot from Hard Disk 0 failed
2017-06-06 18:03:57 (9290): Guest Log: BIOS: Boot : bseqnr=2, bootseq=0003
2017-06-06 18:03:57 (9290): Guest Log: BIOS: Booting from CD-ROM...
2017-06-06 18:04:10 (9290): Guest Log: BIOS: KBD: unsupported int 16h function 03
2017-06-06 18:04:10 (9290): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2017-06-06 18:04:26 (9290): Guest Log: vboxguest: misc device minor 56, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2017-06-06 18:04:28 (9290): Guest Log: net.ipv4.ip_forward = 1
2017-06-06 18:04:29 (9290): Guest Log: sysctl: cannot stat /proc/sys/net/ipv6/conf/all/forwarding: No such file or directory
2017-06-06 18:04:29 (9290): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2017-06-06 18:04:29 (9290): Guest Log: sysctl: "cannot stat %s" is an unknown key
2017-06-06 18:04:29 (9290): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2017-06-06 18:04:29 (9290): Guest Log: Segmentation fault
2017-06-06 18:04:30 (9290): Guest Log: automount ...
2017-06-06 18:04:30 (9290): Guest Log: Is the disk unpartitioned?, test for the 'boot2docker format-me' string
2017-06-06 18:04:30 (9290): Guest Log: automount over.
2017-06-06 18:04:30 (9290): Guest Log: [1;32mSetting hostname to [1;35mboot2docker[0;39m [1;32mDone.[0;39m
2017-06-06 18:04:30 (9290): Guest Log: Tue Jun  6 18:04:28 UTC 2017 dhcp -------------------------------
2017-06-06 18:04:34 (9290): Guest Log: udevadm settle - timeout of 5 seconds reached, the event queue contains:
2017-06-06 18:04:34 (9290): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1305)
2017-06-06 18:04:35 (9290): Guest Log: Tue Jun  6 18:04:34 UTC 2017 dhcp -------------------------------
2017-06-06 18:04:37 (9290): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2017-06-06 18:04:37 (9290): Guest Log: 00:00:00.000832 main     Log opened 2017-06-06T18:04:35.047854000Z
2017-06-06 18:04:37 (9290): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2017-06-06 18:04:37 (9290): Guest Log: 00:00:00.000832 main     Log opened 2017-06-06T18:04:35.047854000Z
2017-06-06 18:04:37 (9290): Guest Log: 00:00:00.005900 main     OS Product: Linux
2017-06-06 18:04:37 (9290): Guest Log: 00:00:00.005976 main     OS Release: 4.1.19-boot2docker
2017-06-06 18:04:37 (9290): Guest Log: 00:00:00.006040 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2017-06-06 18:04:37 (9290): Guest Log: 00:00:00.006101 main     Executable: /sbin/VBoxService
2017-06-06 18:04:37 (9290): Guest Log: 00:00:00.006103 main     Process ID: 735
2017-06-06 18:04:37 (9290): Guest Log: 00:00:00.006104 main     Package type: LINUX_64BITS_GENERIC
2017-06-06 18:04:37 (9290): Guest Log: 000:00:00.007281 main     5.0.16 r105871 started. Verbose level = 0
2017-06-06 18:04:37 (9290): Guest Log: 0:00:00.005900 main     OS Product: Linux
2017-06-06 18:04:37 (9290): Guest Log: 00:00:00.005976 main     OS Release: 4.1.19-boot2docker
2017-06-06 18:04:37 (9290): Guest Log: 00:00:00.006040 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2017-06-06 18:04:37 (9290): Guest Log: 00:00:00.006101 main     Executable: /sbin/VBoxService
2017-06-06 18:04:37 (9290): Guest Log: 00:00:00.006103 main     Process ID: 735
2017-06-06 18:04:37 (9290): Guest Log: 00:00:00.044473 vminfo   rtldrNativeLoad: dlopen('libdbus-1.so.3', RTLD_NOW | RTLD_LOCAL) failed: libdbus-1.so.3: cannot open shared object file: No such file or directory
2017-06-06 18:04:37 (9290): Guest Log: 00:00:00.044632 vminfo   Error: Unable to connect to system D-Bus (1/3): D-Bus not installed
2017-06-06 18:04:37 (9290): Guest Log: 00:00:00.006104 main     Package type: LINUX_64BITS_GENERIC
2017-06-06 18:04:37 (9290): Guest Log: 00:00:00.007281 main     5.0.16 r105871 started. Verbose level = 0
2017-06-06 18:04:37 (9290): Guest Log: Mounting BOINC shared/...
2017-06-06 18:04:37 (9290): Guest Log: -------------------
2017-06-06 18:04:37 (9290): Guest Log: Tue Jun  6 22:04:36 UTC 2017
2017-06-06 18:04:42 (9290): Guest Log: 00:00:05.046170 vminfo   Error: Unable to connect to system D-Bus (2/3): D-Bus not installed
2017-06-06 18:04:42 (9290): Guest Log: Tue Jun  6 22:04:41 UTC 2017
2017-06-06 18:04:42 (9290): Guest Log: 1: lo: <LOOPBACK,UP,LOWER_UP> mtu 65536 qdisc noqueue state UNKNOWN group default 
2017-06-06 18:04:42 (9290): Guest Log:     link/loopback 00:00:00:00:00:00 brd 00:00:00:00:00:00
2017-06-06 18:04:42 (9290): Guest Log:     inet 127.0.0.1/8 scope host lo
2017-06-06 18:04:42 (9290): Guest Log:        valid_lft forever preferred_lft forever
2017-06-06 18:04:42 (9290): Guest Log: 2: dummy0: <BROADCAST,NOARP> mtu 1500 qdisc noop state DOWN group default 
2017-06-06 18:04:42 (9290): Guest Log:     link/ether 62:f8:76:bd:33:b0 brd ff:ff:ff:ff:ff:ff
2017-06-06 18:04:42 (9290): Guest Log: 3: eth0: <BROADCAST,MULTICAST,UP,LOWER_UP> mtu 1500 qdisc pfifo_fast state UP group default qlen 1000
2017-06-06 18:04:42 (9290): Guest Log:     link/ether 08:00:27:94:98:fd brd ff:ff:ff:ff:ff:ff
2017-06-06 18:04:42 (9290): Guest Log:     inet 10.0.2.15/24 brd 10.0.2.255 scope global eth0
2017-06-06 18:04:42 (9290): Guest Log:        valid_lft forever preferred_lft forever
2017-06-06 18:04:42 (9290): Guest Log: -------------------
2017-06-06 18:04:42 (9290): Guest Log: Linking /etc/docker to /var/lib/boot2docker for persistence
2017-06-06 18:04:42 (9290): Guest Log: Waiting for Docker daemon to start...
2017-06-06 18:04:44 (9290): Guest Log: REPOSITORY          TAG                 IMAGE ID            CREATED             SIZE
2017-06-06 18:04:44 (9290): Guest Log: Running boinc_app...
2017-06-06 18:04:44 (9290): Guest Log: Importing Docker image from BOINC...
2017-06-06 18:04:44 (9290): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2017-06-06 18:04:44 (9290): Guest Log: tmpfs                     2.6G    164.1M      2.5G   6% /
2017-06-06 18:04:44 (9290): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2017-06-06 18:04:44 (9290): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2017-06-06 18:04:44 (9290): Guest Log: shared                  140.1G     35.9G    104.2G  26% /root/shared
2017-06-06 18:04:44 (9290): Guest Log: tmpfs                     2.6G    164.1M      2.5G   6% /var/lib/docker/aufs
2017-06-06 18:04:46 (9290): Guest Log: 00:00:10.047385 vminfo   Error: Unable to connect to system D-Bus (3/3): D-Bus not installed
2017-06-06 18:05:54 (9290): Guest Log: doing docker load...
2017-06-06 18:06:17 (9290): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2017-06-06 18:06:17 (9290): Guest Log: tmpfs                     2.6G    783.3M      1.9G  29% /
2017-06-06 18:06:17 (9290): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2017-06-06 18:06:17 (9290): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2017-06-06 18:06:17 (9290): Guest Log: shared                  140.1G     37.6G    102.5G  27% /root/shared
2017-06-06 18:06:17 (9290): Guest Log: tmpfs                     2.6G    783.3M      1.9G  29% /var/lib/docker/aufs
2017-06-06 18:06:17 (9290): Guest Log:               total        used        free      shared  buff/cache   available
2017-06-06 18:06:17 (9290): Guest Log: Mem:           3007          49        2130         783         827        2132
2017-06-06 18:06:17 (9290): Guest Log: Swap:           701           0         701
2017-06-06 18:06:17 (9290): Guest Log: Building apps directory...
2017-06-06 18:06:26 (9290): Guest Log: tar xf /root/shared/appsSource/rappture_grid_tag_1.7.2-6645-2077.tar --directory /root/shared/apps/share64/debian7/rappture/grid
2017-06-06 18:06:33 (9290): Guest Log: tar xf /root/shared/appsSource/rappture_grid_tag_1.7.2-6645-2077_links.tar --directory /root/shared/apps/share64/debian7/rappture/grid
2017-06-06 18:06:33 (9290): Guest Log: mv /root/shared/appsSource/rappture /root/shared/apps/share64/debian7/environ.d
2017-06-06 18:06:40 (9290): Guest Log: Prerun diagnostics...
2017-06-06 18:06:40 (9290): Guest Log: REPOSITORY           TAG                 IMAGE ID            CREATED             SIZE
2017-06-06 18:06:40 (9290): Guest Log: nanohub_apps_scipy   3                   b8b4bf34b085        6 days ago          610 MB
2017-06-06 18:06:40 (9290): Guest Log: CONTAINER ID        IMAGE               COMMAND             CREATED             STATUS              PORTS               NAMES
2017-06-06 18:06:40 (9290): Guest Log: 619.2M	/var/lib/docker
2017-06-06 18:06:40 (9290): Guest Log:               total        used        free      shared  buff/cache   available
2017-06-06 18:06:40 (9290): Guest Log: Mem:           3007          49        2128         783         829        2132
2017-06-06 18:06:40 (9290): Guest Log: Swap:           701           0         701
2017-06-06 18:06:40 (9290): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2017-06-06 18:06:40 (9290): Guest Log: tmpfs                     2.6G    783.3M      1.9G  29% /
2017-06-06 18:06:40 (9290): Guest Log: tmpfs                     1.5G         0      1.5G   0% /dev/shm
2017-06-06 18:06:40 (9290): Guest Log: cgroup                    1.5G         0      1.5G   0% /sys/fs/cgroup
2017-06-06 18:06:40 (9290): Guest Log: shared                  140.1G     37.7G    102.3G  27% /root/shared
2017-06-06 18:06:40 (9290): Guest Log: tmpfs                     2.6G    783.3M      1.9G  29% /var/lib/docker/aufs
2017-06-06 18:06:40 (9290): Guest Log: Running... 
2017-06-06 18:06:41 (9290): Guest Log: 00330605_01.boinc
2017-06-06 18:06:41 (9290): Guest Log: 00330605_01.sh
2017-06-06 18:09:26 (9290): Guest Log: boinc_app exited (0)
2017-06-06 18:09:26 (9290): Guest Log: Saving results...
2017-06-06 18:09:26 (9290): Guest Log: 00330605_01_output.tar.gz
2017-06-06 18:09:26 (9290): VM Completion File Detected.
2017-06-06 18:09:26 (9290): Powering off VM.
2017-06-06 18:09:32 (9290): Successfully stopped VM.
2017-06-06 18:09:32 (9290): Deregistering VM. (boinc_d3362460858bbaec, slot#9)
2017-06-06 18:09:33 (9290): Removing network bandwidth throttle group from VM.
2017-06-06 18:09:34 (9290): Removing storage controller(s) from VM.
2017-06-06 18:09:34 (9290): Removing VM from VirtualBox.
2017-06-06 18:09:37 (9290): Removing virtual ISO 9660 disk from VirtualBox.
18:09:42 (9290): called boinc_finish(0)

</stderr_txt>
<message>
finish file present too long
</message>
]]>