Task 3809

Name boinc2docker_26532_1496179916.217141_0_1
Workunit 1686
Created 30 May 2017, 21:31:58 UTC
Sent 30 May 2017, 21:36:12 UTC
Report deadline 6 Jun 2017, 21:36:12 UTC
Received 30 May 2017, 21:43:55 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 4
Run time 6 min 28 sec
CPU time 5 min 11 sec
Validate state Workunit error - check skipped
Credit 0.00
Device peak FLOPS 2.23 GFLOPS
Application version boinc2docker v1.10 (vbox64_mt)
x86_64-pc-linux-gnu
Peak working set size 74.03 MB
Peak swap size 2.57 GB
Peak disk usage 2.83 GB

Stderr output

<core_client_version>7.4.23</core_client_version>
<![CDATA[
<stderr_txt>
2017-05-30 17:37:19 (31664): vboxwrapper (7.7.26197): starting
2017-05-30 17:37:19 (31664): Feature: Checkpoint interval offset (429 seconds)
2017-05-30 17:37:19 (31664): Detected: VirtualBox VboxManage Interface (Version: 4.3.36)
2017-05-30 17:37:19 (31664): Detected: Minimum checkpoint interval (600.000000 seconds)
2017-05-30 17:37:19 (31664): Create VM. (boinc_8a662eafd7d27393, slot#0)
2017-05-30 17:37:19 (31664): Updating drive controller type and model for desired configuration.
2017-05-30 17:37:25 (31664): Setting Memory Size for VM. (1688MB)
2017-05-30 17:37:26 (31664): Setting CPU Count for VM. (1)
2017-05-30 17:37:26 (31664): Setting Chipset Options for VM.
2017-05-30 17:37:26 (31664): Setting Boot Options for VM.
2017-05-30 17:37:26 (31664): Setting Network Configuration for NAT.
2017-05-30 17:37:26 (31664): Enabling VM Network Access.
2017-05-30 17:37:26 (31664): Disabling USB Support for VM.
2017-05-30 17:37:26 (31664): Disabling COM Port Support for VM.
2017-05-30 17:37:26 (31664): Disabling LPT Port Support for VM.
2017-05-30 17:37:26 (31664): Disabling Audio Support for VM.
2017-05-30 17:37:26 (31664): Disabling Clipboard Support for VM.
2017-05-30 17:37:26 (31664): Disabling Drag and Drop Support for VM.
2017-05-30 17:37:26 (31664): Adding storage controller(s) to VM.
2017-05-30 17:37:26 (31664): Adding virtual ISO 9660 disk drive to VM. (vm_isocontext.iso)
2017-05-30 17:37:26 (31664): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2017-05-30 17:37:26 (31664): Enabling shared directory for VM.
2017-05-30 17:37:26 (31664): Starting VM. (boinc_8a662eafd7d27393, slot#0)
2017-05-30 17:37:28 (31664): Successfully started VM. (PID = '31969')
2017-05-30 17:37:28 (31664): Reporting VM Process ID to BOINC.
2017-05-30 17:37:28 (31664): Guest Log: BIOS: VirtualBox 4.3.36
2017-05-30 17:37:28 (31664): VM state change detected. (old = 'poweroff', new = 'running')
2017-05-30 17:37:28 (31664): Preference change detected
2017-05-30 17:37:28 (31664): Setting CPU throttle for VM. (100%)
2017-05-30 17:37:28 (31664): Setting checkpoint interval to 600 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 600 seconds))
2017-05-30 17:37:30 (31664): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2017-05-30 17:37:30 (31664): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=80
2017-05-30 17:37:30 (31664): Guest Log: BIOS: Boot from Hard Disk 0 failed
2017-05-30 17:37:30 (31664): Guest Log: BIOS: Boot : bseqnr=2, bootseq=0003
2017-05-30 17:37:30 (31664): Guest Log: BIOS: Booting from CD-ROM...
2017-05-30 17:37:31 (31664): Guest Log: BIOS: KBD: unsupported int 16h function 03
2017-05-30 17:37:31 (31664): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2017-05-30 17:37:45 (31664): Guest Log: vboxguest: misc device minor 56, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2017-05-30 17:37:46 (31664): Guest Log: net.ipv4.ip_forward = 1
2017-05-30 17:37:46 (31664): Guest Log: sysctl: cannot stat /proc/sys/net/ipv6/conf/all/forwarding: No such file or directory
2017-05-30 17:37:46 (31664): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2017-05-30 17:37:46 (31664): Guest Log: sysctl: "cannot stat %s" is an unknown key
2017-05-30 17:37:46 (31664): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2017-05-30 17:37:46 (31664): Guest Log: Segmentation fault
2017-05-30 17:37:46 (31664): Guest Log: automount ...
2017-05-30 17:37:46 (31664): Guest Log: Is the disk unpartitioned?, test for the 'boot2docker format-me' string
2017-05-30 17:37:46 (31664): Guest Log: automount over.
2017-05-30 17:37:47 (31664): Guest Log: Setting hostname to boot2docker Done.
2017-05-30 17:37:47 (31664): Guest Log: Tue May 30 17:37:44 UTC 2017 dhcp -------------------------------
2017-05-30 17:37:52 (31664): Guest Log: udevadm settle - timeout of 5 seconds reached, the event queue contains:
2017-05-30 17:37:52 (31664): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1303)
2017-05-30 17:37:53 (31664): Guest Log: Tue May 30 17:37:50 UTC 2017 dhcp -------------------------------
2017-05-30 17:37:54 (31664): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2017-05-30 17:37:54 (31664): Guest Log: 00:00:00.000759 main     Log opened 2017-05-30T17:37:51.212106000Z
2017-05-30 17:37:54 (31664): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2017-05-30 17:37:54 (31664): Guest Log: 00:00:00.000759 main     Log opened 2017-05-30T17:37:51.212106000Z
2017-05-30 17:37:54 (31664): Guest Log: 00:00:00.005613 main     OS Product: Linux
2017-05-30 17:37:54 (31664): Guest Log: 00:00:00.005784 main     OS Release: 4.1.19-boot2docker
2017-05-30 17:37:54 (31664): Guest Log: 00:00:00.005899 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2017-05-30 17:37:54 (31664): Guest Log: 00:00:00.005999 main     Executable: /sbin/VBoxService
2017-05-30 17:37:54 (31664): Guest Log: 00:00:00.006008 main     Process ID: 720
2017-05-30 17:37:54 (31664): Guest Log: 00:00:00.006015 main     Package type: LINUX_64BITS_GENERIC
2017-05-30 17:37:54 (31664): Guest Log: 00:000:00:00.007256 main     5.0.16 r105871 started. Verbose level = 0
2017-05-30 17:37:54 (31664): Guest Log: 0:00.005613 main     OS Product: Linux
2017-05-30 17:37:54 (31664): Guest Log: 00:00:00.005784 main     OS Release: 4.1.19-boot2docker
2017-05-30 17:37:54 (31664): Guest Log: 00:00:00.005899 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2017-05-30 17:37:54 (31664): Guest Log: 00:00:00.005999 main     Executable: /sbin/VBoxService
2017-05-30 17:37:54 (31664): Guest Log: 00:00:00.006008 main     Process ID: 720
2017-05-30 17:37:54 (31664): Guest Log: 00:00:00.041347 vminfo   rtldrNativeLoad: dlopen('libdbus-1.so.3', RTLD_NOW | RTLD_LOCAL) failed: libdbus-1.so.3: cannot open shared object file: No such file or directory
2017-05-30 17:37:54 (31664): Guest Log: 00:00:00.041472 vminfo   Error: Unable to connect to system D-Bus (1/3): D-Bus not installed
2017-05-30 17:37:54 (31664): Guest Log: 00:00:00.006015 main     Package type: LINUX_64BITS_GENERIC
2017-05-30 17:37:54 (31664): Guest Log: 00:00:00.007256 main     5.0.16 r105871 started. Verbose level = 0
2017-05-30 17:37:54 (31664): Guest Log: Mounting BOINC shared/...
2017-05-30 17:37:54 (31664): Guest Log: -------------------
2017-05-30 17:37:54 (31664): Guest Log: Tue May 30 21:37:53 UTC 2017
2017-05-30 17:37:59 (31664): Guest Log: 00:00:05.046120 vminfo   Error: Unable to connect to system D-Bus (2/3): D-Bus not installed
2017-05-30 17:37:59 (31664): Guest Log: Tue May 30 21:37:58 UTC 2017
2017-05-30 17:37:59 (31664): Guest Log: 1: lo: <LOOPBACK,UP,LOWER_UP> mtu 65536 qdisc noqueue state UNKNOWN group default 
2017-05-30 17:37:59 (31664): Guest Log:     link/loopback 00:00:00:00:00:00 brd 00:00:00:00:00:00
2017-05-30 17:37:59 (31664): Guest Log:     inet 127.0.0.1/8 scope host lo
2017-05-30 17:37:59 (31664): Guest Log:        valid_lft forever preferred_lft forever
2017-05-30 17:37:59 (31664): Guest Log: 2: dummy0: <BROADCAST,NOARP> mtu 1500 qdisc noop state DOWN group default 
2017-05-30 17:37:59 (31664): Guest Log:     link/ether 0a:26:4b:3f:05:ed brd ff:ff:ff:ff:ff:ff
2017-05-30 17:37:59 (31664): Guest Log: 3: eth0: <BROADCAST,MULTICAST,UP,LOWER_UP> mtu 1500 qdisc pfifo_fast state UP group default qlen 1000
2017-05-30 17:37:59 (31664): Guest Log:     link/ether 08:00:27:8b:77:e7 brd ff:ff:ff:ff:ff:ff
2017-05-30 17:37:59 (31664): Guest Log:     inet 10.0.2.15/24 brd 10.0.2.255 scope global eth0
2017-05-30 17:37:59 (31664): Guest Log:        valid_lft forever preferred_lft forever
2017-05-30 17:37:59 (31664): Guest Log: -------------------
2017-05-30 17:37:59 (31664): Guest Log: Linking /etc/docker to /var/lib/boot2docker for persistence
2017-05-30 17:37:59 (31664): Guest Log: Waiting for Docker daemon to start...
2017-05-30 17:38:01 (31664): Guest Log: REPOSITORY          TAG                 IMAGE ID            CREATED             SIZE
2017-05-30 17:38:01 (31664): Guest Log: Running boinc_app...
2017-05-30 17:38:01 (31664): Guest Log: Importing Docker image from BOINC...
2017-05-30 17:38:01 (31664): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2017-05-30 17:38:01 (31664): Guest Log: tmpfs                     1.4G    164.1M      1.3G  11% /
2017-05-30 17:38:01 (31664): Guest Log: tmpfs                   823.3M         0    823.3M   0% /dev/shm
2017-05-30 17:38:01 (31664): Guest Log: cgroup                  823.3M         0    823.3M   0% /sys/fs/cgroup
2017-05-30 17:38:01 (31664): Guest Log: shared                  886.1G     74.8G    811.2G   8% /root/shared
2017-05-30 17:38:01 (31664): Guest Log: tmpfs                     1.4G    164.1M      1.3G  11% /var/lib/docker/aufs
2017-05-30 17:38:03 (31664): Guest Log: 00:00:10.047620 vminfo   Error: Unable to connect to system D-Bus (3/3): D-Bus not installed
2017-05-30 17:38:08 (31664): Guest Log: doing docker load...
2017-05-30 17:38:20 (31664): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2017-05-30 17:38:20 (31664): Guest Log: tmpfs                     1.4G    483.0M    998.9M  33% /
2017-05-30 17:38:20 (31664): Guest Log: tmpfs                   823.3M         0    823.3M   0% /dev/shm
2017-05-30 17:38:20 (31664): Guest Log: cgroup                  823.3M         0    823.3M   0% /sys/fs/cgroup
2017-05-30 17:38:20 (31664): Guest Log: shared                  886.1G     74.7G    811.4G   8% /root/shared
2017-05-30 17:38:20 (31664): Guest Log: tmpfs                     1.4G    483.0M    998.9M  33% /var/lib/docker/aufs
2017-05-30 17:38:20 (31664): Guest Log:               total        used        free      shared  buff/cache   available
2017-05-30 17:38:20 (31664): Guest Log: Mem:           1646          47        1081         482         517        1084
2017-05-30 17:38:20 (31664): Guest Log: Swap:           361           0         361
2017-05-30 17:38:20 (31664): Guest Log: Building apps directory...
2017-05-30 17:38:23 (31664): Guest Log: tar xf /root/shared/appsSource/rappture_grid_tag_1.7.2-6645-2077.tar --directory /root/shared/apps/share64/debian7/rappture/grid
2017-05-30 17:38:30 (31664): Guest Log: tar xf /root/shared/appsSource/rappture_grid_tag_1.7.2-6645-2077_links.tar --directory /root/shared/apps/share64/debian7/rappture/grid
2017-05-30 17:38:31 (31664): Guest Log: mv /root/shared/appsSource/rappture /root/shared/apps/share64/debian7/environ.d
2017-05-30 17:43:10 (31664): Guest Log: Prerun diagnostics...
2017-05-30 17:43:10 (31664): Guest Log: REPOSITORY          TAG                 IMAGE ID            CREATED             SIZE
2017-05-30 17:43:10 (31664): Guest Log: nanohub_apps_base   9                   d6348731ecce        4 days ago          308.5 MB
2017-05-30 17:43:10 (31664): Guest Log: CONTAINER ID        IMAGE               COMMAND             CREATED             STATUS              PORTS               NAMES
2017-05-30 17:43:10 (31664): Guest Log: 318.9M	/var/lib/docker
2017-05-30 17:43:10 (31664): Guest Log:               total        used        free      shared  buff/cache   available
2017-05-30 17:43:10 (31664): Guest Log: Mem:           1646          48        1063         482         534        1080
2017-05-30 17:43:10 (31664): Guest Log: Swap:           361           0         361
2017-05-30 17:43:10 (31664): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2017-05-30 17:43:10 (31664): Guest Log: tmpfs                     1.4G    483.0M    998.9M  33% /
2017-05-30 17:43:10 (31664): Guest Log: tmpfs                   823.3M         0    823.3M   0% /dev/shm
2017-05-30 17:43:10 (31664): Guest Log: cgroup                  823.3M         0    823.3M   0% /sys/fs/cgroup
2017-05-30 17:43:10 (31664): Guest Log: shared                  886.1G     77.2G    808.9G   9% /root/shared
2017-05-30 17:43:10 (31664): Guest Log: tmpfs                     1.4G    483.0M    998.9M  33% /var/lib/docker/aufs
2017-05-30 17:43:10 (31664): Guest Log: Running... 
2017-05-30 17:43:10 (31664): Guest Log: 00330568_01.boinc
2017-05-30 17:43:10 (31664): Guest Log: 00330568_01.sh
2017-05-30 17:43:41 (31664): Guest Log: boinc_app exited (0)
2017-05-30 17:43:41 (31664): Guest Log: Saving results...
2017-05-30 17:43:41 (31664): Guest Log: 00330568_01_output.tar.gz
2017-05-30 17:43:41 (31664): VM Completion File Detected.
2017-05-30 17:43:41 (31664): Powering off VM.
2017-05-30 17:43:41 (31664): Successfully stopped VM.
2017-05-30 17:43:41 (31664): Deregistering VM. (boinc_8a662eafd7d27393, slot#0)
2017-05-30 17:43:41 (31664): Removing network bandwidth throttle group from VM.
2017-05-30 17:43:41 (31664): Removing storage controller(s) from VM.
2017-05-30 17:43:41 (31664): Removing VM from VirtualBox.
2017-05-30 17:43:41 (31664): Removing virtual ISO 9660 disk from VirtualBox.
17:43:46 (31664): called boinc_finish(0)

</stderr_txt>
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