Task 3095

Name boinc2docker_19117_1495236357.761109_0_2
Workunit 1362
Created 19 May 2017, 23:46:07 UTC
Sent 19 May 2017, 23:46:45 UTC
Report deadline 26 May 2017, 23:46:45 UTC
Received 20 May 2017, 0:16:17 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 3
Run time 5 min 14 sec
CPU time 2 min 45 sec
Validate state Workunit error - check skipped
Credit 0.00
Device peak FLOPS 2.24 GFLOPS
Application version boinc2docker v1.10 (vbox64_mt)
x86_64-pc-linux-gnu
Peak working set size 84.94 MB
Peak swap size 2.99 GB
Peak disk usage 759.90 MB

Stderr output

<core_client_version>7.4.23</core_client_version>
<![CDATA[
<stderr_txt>
2017-05-19 20:10:25 (19316): vboxwrapper (7.7.26197): starting
2017-05-19 20:10:25 (19316): Feature: Checkpoint interval offset (265 seconds)
2017-05-19 20:10:25 (19316): Detected: VirtualBox VboxManage Interface (Version: 4.3.36)
2017-05-19 20:10:25 (19316): Detected: Minimum checkpoint interval (600.000000 seconds)
2017-05-19 20:10:25 (19316): Create VM. (boinc_15adea0240d3031d, slot#3)
2017-05-19 20:10:25 (19316): Updating drive controller type and model for desired configuration.
2017-05-19 20:10:28 (19316): Setting Memory Size for VM. (1924MB)
2017-05-19 20:10:28 (19316): Setting CPU Count for VM. (1)
2017-05-19 20:10:28 (19316): Setting Chipset Options for VM.
2017-05-19 20:10:28 (19316): Setting Boot Options for VM.
2017-05-19 20:10:28 (19316): Setting Network Configuration for NAT.
2017-05-19 20:10:28 (19316): Enabling VM Network Access.
2017-05-19 20:10:28 (19316): Disabling USB Support for VM.
2017-05-19 20:10:28 (19316): Disabling COM Port Support for VM.
2017-05-19 20:10:28 (19316): Disabling LPT Port Support for VM.
2017-05-19 20:10:28 (19316): Disabling Audio Support for VM.
2017-05-19 20:10:28 (19316): Disabling Clipboard Support for VM.
2017-05-19 20:10:29 (19316): Disabling Drag and Drop Support for VM.
2017-05-19 20:10:29 (19316): Adding storage controller(s) to VM.
2017-05-19 20:10:29 (19316): Adding virtual ISO 9660 disk drive to VM. (vm_isocontext.iso)
2017-05-19 20:10:29 (19316): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2017-05-19 20:10:29 (19316): Enabling shared directory for VM.
2017-05-19 20:10:29 (19316): Starting VM. (boinc_15adea0240d3031d, slot#3)
2017-05-19 20:10:30 (19316): Successfully started VM. (PID = '19916')
2017-05-19 20:10:30 (19316): Reporting VM Process ID to BOINC.
2017-05-19 20:10:30 (19316): Guest Log: BIOS: VirtualBox 4.3.36
2017-05-19 20:10:31 (19316): VM state change detected. (old = 'poweroff', new = 'running')
2017-05-19 20:10:31 (19316): Preference change detected
2017-05-19 20:10:31 (19316): Setting CPU throttle for VM. (100%)
2017-05-19 20:10:31 (19316): Setting checkpoint interval to 600 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 600 seconds))
2017-05-19 20:10:33 (19316): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2017-05-19 20:10:33 (19316): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=80
2017-05-19 20:10:33 (19316): Guest Log: BIOS: Boot from Hard Disk 0 failed
2017-05-19 20:10:33 (19316): Guest Log: BIOS: Boot : bseqnr=2, bootseq=0003
2017-05-19 20:10:33 (19316): Guest Log: BIOS: Booting from CD-ROM...
2017-05-19 20:10:34 (19316): Guest Log: BIOS: KBD: unsupported int 16h function 03
2017-05-19 20:10:34 (19316): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2017-05-19 20:10:50 (19316): Guest Log: vboxguest: misc device minor 56, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2017-05-19 20:10:50 (19316): Guest Log: net.ipv4.ip_forward = 1
2017-05-19 20:10:50 (19316): Guest Log: sysctl: cannot stat /proc/sys/net/ipv6/conf/all/forwarding: No such file or directory
2017-05-19 20:10:50 (19316): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2017-05-19 20:10:50 (19316): Guest Log: sysctl: "cannot stat %s" is an unknown key
2017-05-19 20:10:50 (19316): Guest Log: sysctl: setting key "cannot stat %s": No such file or directory
2017-05-19 20:10:50 (19316): Guest Log: Segmentation fault
2017-05-19 20:10:51 (19316): Guest Log: automount ...
2017-05-19 20:10:51 (19316): Guest Log: Is the disk unpartitioned?, test for the 'boot2docker format-me' string
2017-05-19 20:10:51 (19316): Guest Log: automount over.
2017-05-19 20:10:51 (19316): Guest Log: Setting hostname to boot2docker Done.
2017-05-19 20:10:51 (19316): Guest Log: Fri May 19 20:10:48 UTC 2017 dhcp -------------------------------
2017-05-19 20:10:56 (19316): Guest Log: udevadm settle - timeout of 5 seconds reached, the event queue contains:
2017-05-19 20:10:56 (19316): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/input/input6 (1288)
2017-05-19 20:10:56 (19316): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/LNXVIDEO:00/input/input6/event5 (1289)
2017-05-19 20:10:56 (19316): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/PNP0C0A:00 (1293)
2017-05-19 20:10:56 (19316): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/APP0001:00 (1296)
2017-05-19 20:10:56 (19316): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0000:00 (1297)
2017-05-19 20:10:56 (19316): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0100:00 (1298)
2017-05-19 20:10:56 (19316): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0103:00 (1299)
2017-05-19 20:10:56 (19316): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0200:00 (1300)
2017-05-19 20:10:56 (19316): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0700:00 (1303)
2017-05-19 20:10:56 (19316): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0B00:00 (1304)
2017-05-19 20:10:56 (19316): Guest Log:   /sys/devices/LNXSYSTM:00/LNXSYBUS:00/PNP0A03:00/device:00/PNP0F03:00 (1305)
2017-05-19 20:10:57 (19316): Guest Log: Fri May 19 20:10:54 UTC 2017 dhcp -------------------------------
2017-05-19 20:10:57 (19316): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2017-05-19 20:10:57 (19316): Guest Log: 00:00:00.000910 main     Log opened 2017-05-19T20:10:55.181951000Z
2017-05-19 20:10:57 (19316): Guest Log: VBoxService 5.0.16 r105871 (verbosity: 0) linux.amd64 (Mar  4 2016 17:38:55) release log
2017-05-19 20:10:57 (19316): Guest Log: 00:00:00.000910 main     Log opened 2017-05-19T20:10:55.181951000Z
2017-05-19 20:10:57 (19316): Guest Log: 00:00:00.006349 main     OS Product: Linux
2017-05-19 20:10:57 (19316): Guest Log: 00:00:00.006430 main     OS Release: 4.1.19-boot2docker
2017-05-19 20:10:57 (19316): Guest Log: 00:00:00.006498 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2017-05-19 20:10:57 (19316): Guest Log: 00:00:00.006561 main     Executable: /sbin/VBoxService
2017-05-19 20:10:57 (19316): Guest Log: 00:00:00.006562 main     Process ID: 736
2017-05-19 20:10:57 (19316): Guest Log: 00:00:00.006563 main     Package type: LINUX_64BITS_GENERIC
2017-05-19 20:10:57 (19316): Guest Log: 00:00:00:00:00.007813 main     5.0.16 r105871 started. Verbose level = 0
2017-05-19 20:10:57 (19316): Guest Log: 00.006349 main     OS Product: Linux
2017-05-19 20:10:57 (19316): Guest Log: 00:00:00.006430 main     OS Release: 4.1.19-boot2docker
2017-05-19 20:10:57 (19316): Guest Log: 00:00:00.006498 main     OS Version: #1 SMP Sun Apr 17 19:40:54 UTC 2016
2017-05-19 20:10:57 (19316): Guest Log: 00:00:00.006561 main     Executable: /sbin/VBoxService
2017-05-19 20:10:57 (19316): Guest Log: 00:00:00.006562 main     Process ID: 736
2017-05-19 20:10:57 (19316): Guest Log: 00:00:00.006563 main     Package type: LINUX_64BITS_GENERIC
2017-05-19 20:10:58 (19316): Guest Log: 00:00:00.00:00:00.049152 vminfo   rtldrNativeLoad: dlopen('libdbus-1.so.3', RTLD_NOW | RTLD_LOCAL) failed: libdbus-1.so.3: cannot open shared object file: No such file or directory
2017-05-19 20:10:58 (19316): Guest Log: 00:00:00.049320 vminfo   Error: Unable to connect to system D-Bus (1/3): D-Bus not installed
2017-05-19 20:10:58 (19316): Guest Log: 007813 main     5.0.16 r105871 started. Verbose level = 0
2017-05-19 20:10:58 (19316): Guest Log: Mounting BOINC shared/...
2017-05-19 20:10:58 (19316): Guest Log: -------------------
2017-05-19 20:10:58 (19316): Guest Log: Sat May 20 00:10:58 UTC 2017
2017-05-19 20:11:03 (19316): Guest Log: 00:00:05.054711 vminfo   Error: Unable to connect to system D-Bus (2/3): D-Bus not installed
2017-05-19 20:11:03 (19316): Guest Log: Sat May 20 00:11:03 UTC 2017
2017-05-19 20:11:03 (19316): Guest Log: 1: lo: <LOOPBACK,UP,LOWER_UP> mtu 65536 qdisc noqueue state UNKNOWN group default 
2017-05-19 20:11:03 (19316): Guest Log:     link/loopback 00:00:00:00:00:00 brd 00:00:00:00:00:00
2017-05-19 20:11:03 (19316): Guest Log:     inet 127.0.0.1/8 scope host lo
2017-05-19 20:11:03 (19316): Guest Log:        valid_lft forever preferred_lft forever
2017-05-19 20:11:03 (19316): Guest Log: 2: dummy0: <BROADCAST,NOARP> mtu 1500 qdisc noop state DOWN group default 
2017-05-19 20:11:03 (19316): Guest Log:     link/ether ae:2a:a4:36:b9:00 brd ff:ff:ff:ff:ff:ff
2017-05-19 20:11:03 (19316): Guest Log: 3: eth0: <BROADCAST,MULTICAST,UP,LOWER_UP> mtu 1500 qdisc pfifo_fast state UP group default qlen 1000
2017-05-19 20:11:03 (19316): Guest Log:     link/ether 08:00:27:15:af:c6 brd ff:ff:ff:ff:ff:ff
2017-05-19 20:11:03 (19316): Guest Log:     inet 10.0.2.15/24 brd 10.0.2.255 scope global eth0
2017-05-19 20:11:03 (19316): Guest Log:        valid_lft forever preferred_lft forever
2017-05-19 20:11:03 (19316): Guest Log: -------------------
2017-05-19 20:11:03 (19316): Guest Log: Linking /etc/docker to /var/lib/boot2docker for persistence
2017-05-19 20:11:03 (19316): Guest Log: Waiting for Docker daemon to start...
2017-05-19 20:11:05 (19316): Guest Log: REPOSITORY          TAG                 IMAGE ID            CREATED             SIZE
2017-05-19 20:11:05 (19316): Guest Log: Running boinc_app...
2017-05-19 20:11:05 (19316): Guest Log: Importing Docker image from BOINC...
2017-05-19 20:11:05 (19316): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2017-05-19 20:11:05 (19316): Guest Log: tmpfs                     1.7G    164.1M      1.5G  10% /
2017-05-19 20:11:06 (19316): Guest Log: tmpfs                   939.3M         0    939.3M   0% /dev/shm
2017-05-19 20:11:06 (19316): Guest Log: cgroup                  939.3M         0    939.3M   0% /sys/fs/cgroup
2017-05-19 20:11:06 (19316): Guest Log: shared                  140.1G     23.7G    116.4G  17% /root/shared
2017-05-19 20:11:06 (19316): Guest Log: tmpfs                     1.7G    164.1M      1.5G  10% /var/lib/docker/aufs
2017-05-19 20:11:08 (19316): Guest Log: 00:00:10.055636 vminfo   Error: Unable to connect to system D-Bus (3/3): D-Bus not installed
2017-05-19 20:11:16 (19316): Guest Log: doing docker load...
2017-05-19 20:11:31 (19316): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2017-05-19 20:11:31 (19316): Guest Log: tmpfs                     1.7G    541.9M      1.1G  32% /
2017-05-19 20:11:31 (19316): Guest Log: tmpfs                   939.3M         0    939.3M   0% /dev/shm
2017-05-19 20:11:31 (19316): Guest Log: cgroup                  939.3M         0    939.3M   0% /sys/fs/cgroup
2017-05-19 20:11:31 (19316): Guest Log: shared                  140.1G     24.1G    116.0G  17% /root/shared
2017-05-19 20:11:31 (19316): Guest Log: tmpfs                     1.7G    541.9M      1.1G  32% /var/lib/docker/aufs
2017-05-19 20:11:31 (19316): Guest Log:               total        used        free      shared  buff/cache   available
2017-05-19 20:11:31 (19316): Guest Log: Mem:           1878          50        1252         541         575        1254
2017-05-19 20:11:31 (19316): Guest Log: Swap:           420           0         420
2017-05-19 20:11:31 (19316): Guest Log: Building apps directory...
2017-05-19 20:11:38 (19316): Guest Log: tar xf /root/shared/appsSource/rappture_grid_tag_1.7.2-6645-2077.tar --directory /root/shared/apps/share64/debian7/rappture/grid
2017-05-19 20:11:52 (19316): Guest Log: tar xf /root/shared/appsSource/rappture_grid_tag_1.7.2-6645-2077_links.tar --directory /root/shared/apps/share64/debian7/rappture/grid
2017-05-19 20:11:52 (19316): Guest Log: mv /root/shared/appsSource/rappture /root/shared/apps/share64/debian7/environ.d
2017-05-19 20:15:23 (19316): Guest Log: Prerun diagnostics...
2017-05-19 20:15:23 (19316): Guest Log: REPOSITORY                    TAG                 IMAGE ID            CREATED             SIZE
2017-05-19 20:15:23 (19316): Guest Log: nanohub_apps_share64_octave   2                   f63b6be27724        2 hours ago         370.8 MB
2017-05-19 20:15:23 (19316): Guest Log: CONTAINER ID        IMAGE               COMMAND             CREATED             STATUS              PORTS               NAMES
2017-05-19 20:15:23 (19316): Guest Log: 377.8M	/var/lib/docker
2017-05-19 20:15:23 (19316): Guest Log:               total        used        free      shared  buff/cache   available
2017-05-19 20:15:23 (19316): Guest Log: Mem:           1878          51        1247         541         579        1253
2017-05-19 20:15:23 (19316): Guest Log: Swap:           420           0         420
2017-05-19 20:15:23 (19316): Guest Log: Filesystem                Size      Used Available Use% Mounted on
2017-05-19 20:15:23 (19316): Guest Log: tmpfs                     1.7G    541.9M      1.1G  32% /
2017-05-19 20:15:23 (19316): Guest Log: tmpfs                   939.3M         0    939.3M   0% /dev/shm
2017-05-19 20:15:23 (19316): Guest Log: cgroup                  939.3M         0    939.3M   0% /sys/fs/cgroup
2017-05-19 20:15:23 (19316): Guest Log: shared                  140.1G     26.0G    114.1G  19% /root/shared
2017-05-19 20:15:23 (19316): Guest Log: tmpfs                     1.7G    541.9M      1.1G  32% /var/lib/docker/aufs
2017-05-19 20:15:23 (19316): Guest Log: Running... 
2017-05-19 20:15:24 (19316): Guest Log: 00330161_01.boinc
2017-05-19 20:15:24 (19316): Guest Log: 00330161_01.sh
2017-05-19 20:16:02 (19316): Guest Log: boinc_app exited (0)
2017-05-19 20:16:02 (19316): Guest Log: Saving results...
2017-05-19 20:16:02 (19316): Guest Log: 00330161_01_output.tar.gz
2017-05-19 20:16:02 (19316): VM Completion File Detected.
2017-05-19 20:16:02 (19316): Powering off VM.
2017-05-19 20:16:03 (19316): Successfully stopped VM.
2017-05-19 20:16:03 (19316): Deregistering VM. (boinc_15adea0240d3031d, slot#3)
2017-05-19 20:16:03 (19316): Removing network bandwidth throttle group from VM.
2017-05-19 20:16:03 (19316): Removing storage controller(s) from VM.
2017-05-19 20:16:03 (19316): Removing VM from VirtualBox.
2017-05-19 20:16:03 (19316): Removing virtual ISO 9660 disk from VirtualBox.
20:16:09 (19316): called boinc_finish(0)

</stderr_txt>
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